Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1502 |
Symbol | |
ID | 8325682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1657917 |
End bp | 1659635 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644942049 |
Product | type III restriction protein res subunit |
Protein accession | YP_003099299 |
Protein GI | 256375639 |
COG category | [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG1061] DNA or RNA helicases of superfamily II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTCCGCAC CCCAGGTCGT GTCGACCCGA CCGCTGCGGG CGTGGCAGCG CCGGGCGCTG ACCAAGTACC TCGCCTCCGG CCCGAAGGAC TTCCTGGCGG TCGCCACGCC CGGCGCGGGC AAGACCACGT TCGGGCTGCG GGTCGCCGCC GAGCTGCTGG CCGACCGCAC GGTCGAGGCC GTGACGATCG TCGCGCCGAC CGAGCACCTC AAGCACCAGT GGGCGAAGGC CGCGGCCGAG GCAGGCATCG CGATCGACTC GAACTTCCGC AACACGAACG CGGTCACCTC CAGGGACTAC CACGGCGTGG CCGTGACGTA CGCGCAGGTG GCGGCCCACC CCACGCTGCA CCGGGTGCGC ACCGAGAACC GCAAGACGCT CGTGCTGCTC GACGAGGTGC ACCACGGTGG TGACGCCAAG TCGTGGGGCG ACGCGATCCG CGAGGCGTTC ACCCCGGCGA CGCGCAGGCT GTCGCTGACC GGGACGCCGT TCCGCAGCGA CGACTCGCCG ATCCCGTTCA TCTCCTACGA GCACGCGGCC GACGGCACCC AGCGCAGCCG CTCCGACCAC GCCTACGGCT ACGCCGACGC GCTGCGCGAC GGCGTGGTCC GGCCGGTGAT CTTCCTGGCC TACTCGGGCG AGGCGCACTG GCGCACCAGC GCTGGCGAGG AGTTCGTGGC GCGCCTGGGC GAGCCGCTGA CCCAGGAGCA GACCGCGCGC GCCTGGCGGA CCGCACTCGA CCCGACCGGC GAGTGGATGC CGTCGGTGCT GATGGCGGCG GACAAGCGGC TCACCCAGCT GCGCGCGAAC GGCATCCCGG ACGCGGGCGG CCTGGTCATC GCGACCGACC AGACCGTGGC GAAGGCGTAC GCGGAGATCC TCAAGCGCGT GACCGGCCAC GACGCGACCC TGGTGCTCTC GGACGACCCG AAGGCGTCGG GTCGCATCGC CGAGTTCGCG GCCACCACCG AGCGCTGGAT GATCGCGGTG CGGATGGTGT CCGAGGGCGT GGACGTGCCC CGGCTGGCCG TGGGCGTGTA CGCCACCAGC GCGTCGACGC CGCTGTACTT CGCGCAGGCC ATCGGCCGGT TCGTGCGCTC GCGCGCGAAG GGCGAGACGG CCAGCGTGTT CCTGCCCAGC GTGCCGGTGC TGCTGGGGCT GGCCAGCGAG CTGGAGCAGC AGCGCGACCA CATCCTCGGC AAGCCGCACC GGGAGAAGGA CGGCTGGGAC GACGAGCTGC TCGCCCAGGC CAACCAGACC AAGGACGAGG AGGGCGAGGA GGACCGCGCG TTCACCGTCC TCGGCGCCTC GGCCGAGCTG GACCAGGTGA TCTACGACGG CTCGTCGTTC GGCACGGCGG CGCACGTGGG CAGCGAGGAG GAGCAGGAGT ACCTGGGCCT GCCGGGCCTG CTCGCGCCCG ACCAGGTGCG CGCCCTGCTG CGCCAGCGCC AGGAGAAGCA GCTGGTGGAG GCCAGCAAGC GCAAGGCCGA CGCCCCCGCC CCCGCGGCCC CGGCGGTGAC CAGGCCGGCG AGCGTGCAGG AGCAGCTCGC GACGCTGCGC AAGGAGCTGA ACACCCTGGT CGCGATGCAC CACCACCGCA CCAAGAAGCC GCACGGCAAG ATCCACAACC AGCTCCGCGA GTACTGCGGC GGCCCGCCGA CCGCGATGGC GTCGATCGAG CAGCTCGAAG AGCGCATCGC GACTCTGCGC TCCTGGTAG
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Protein sequence | MSAPQVVSTR PLRAWQRRAL TKYLASGPKD FLAVATPGAG KTTFGLRVAA ELLADRTVEA VTIVAPTEHL KHQWAKAAAE AGIAIDSNFR NTNAVTSRDY HGVAVTYAQV AAHPTLHRVR TENRKTLVLL DEVHHGGDAK SWGDAIREAF TPATRRLSLT GTPFRSDDSP IPFISYEHAA DGTQRSRSDH AYGYADALRD GVVRPVIFLA YSGEAHWRTS AGEEFVARLG EPLTQEQTAR AWRTALDPTG EWMPSVLMAA DKRLTQLRAN GIPDAGGLVI ATDQTVAKAY AEILKRVTGH DATLVLSDDP KASGRIAEFA ATTERWMIAV RMVSEGVDVP RLAVGVYATS ASTPLYFAQA IGRFVRSRAK GETASVFLPS VPVLLGLASE LEQQRDHILG KPHREKDGWD DELLAQANQT KDEEGEEDRA FTVLGASAEL DQVIYDGSSF GTAAHVGSEE EQEYLGLPGL LAPDQVRALL RQRQEKQLVE ASKRKADAPA PAAPAVTRPA SVQEQLATLR KELNTLVAMH HHRTKKPHGK IHNQLREYCG GPPTAMASIE QLEERIATLR SW
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