Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1349 |
Symbol | |
ID | 8325529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 1490886 |
End bp | 1491779 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644941897 |
Product | domain of unknown function DUF1731 |
Protein accession | YP_003099147 |
Protein GI | 256375487 |
COG category | [R] General function prediction only |
COG ID | [COG1090] Predicted nucleoside-diphosphate sugar epimerase |
TIGRFAM ID | [TIGR01777] conserved hypothetical protein TIGR01777 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.678598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCGTGG TCATCGCTGG TTCCTCGGGT CTCATCGGCA CTTCTCTGGT GGCGGCGCTG CGCGCGGGTG GTCACGACGT GCTCCGGCTG GTGCGGCGCA GGCCCTCCGC GCCGGACGAG CGGTTCTGGG ACCCGCCCTC GGCGAAGATC GACGAGGGGA CGCTGGAGCG GGTCGACGCC GTGGTGAACC TGTGCGGGGC CGGGGTCGGG GACCGCCGGT GGAACGACGC GCGCAAGCAG GTCCTGCTGG ACACCCGCAC CACGCCCACC GAGGTGCTGG CCGCCGCCGT CGTGCAGCAC CGGGTGCCGG TGCTGGTGAA CGCGAGCGCG GTCGGGTTCT ACGGCGACAC CGGCGAGGCG CTGGTGGACG AGGGCACCCC GTCCGGGACC GGGTTCCTGG CCGCGCTGTG CCGCGAGTGG GAGGGCGCGA CCCGGCAGGC CGAGGAGGCC GGGGTGCGCG TGGTCAAGCT GCGCACCGGG CTGGTGATCA GCCCGTCCGG CGGGCTGTTC GGCAAGCTCA AGCCGCTGTT CTCGTTCGGG CTGGGCGGCA GGCTCGGGTC CGGGCGGCAG TACATGCCGT GGATCGCGCT GGACGACGTG GTCGCGGCGA TCGGGCACGT GCTGGAGACC GGGACCGTGG ACGGCCCGGT GAACCTGACC GCGCCGAGCC CGGTGACCAA CGCCGAGTTC ACCCGCACGC TCGGGCACGC GCTGCACCGG CCGACGCCCT GGGTGGTGCC GCCGTTCGCG CTGAAGGCGG TGCTGGGCGG GCTGGCCGAG GAGGGCGTGC TGGCGGGGCA GCGGGCGGTG CCGAAGGCGC TGGAGCGGTC CGGCTTCACG TTCCTGCACC CGGCGCTCGG GTCCGCCGTC GCCGCCGCGA TCACACCCCG GTAG
|
Protein sequence | MRVVIAGSSG LIGTSLVAAL RAGGHDVLRL VRRRPSAPDE RFWDPPSAKI DEGTLERVDA VVNLCGAGVG DRRWNDARKQ VLLDTRTTPT EVLAAAVVQH RVPVLVNASA VGFYGDTGEA LVDEGTPSGT GFLAALCREW EGATRQAEEA GVRVVKLRTG LVISPSGGLF GKLKPLFSFG LGGRLGSGRQ YMPWIALDDV VAAIGHVLET GTVDGPVNLT APSPVTNAEF TRTLGHALHR PTPWVVPPFA LKAVLGGLAE EGVLAGQRAV PKALERSGFT FLHPALGSAV AAAITPR
|
| |