Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1284 |
Symbol | |
ID | 8325461 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 1422483 |
End bp | 1423250 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644941829 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003099082 |
Protein GI | 256375422 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTTGATC GTCATGCTCC TGCGTCCGGT CAGCATGGCT ACCGCGCGAT CGCGGACGGG CTGCGCTCGC AGATCGACTC CGGTGAACTG GCGCCCGGCA GCAAGGTCCC CGGCGAGAAC GAGCTGATGG CCCTTCACGG CGTCGAGCAG CCAACCGCCA GGCGGGCGTT GGAGGTGCTG AAGAACGAGG GGCTGATCAT CGCCCGTCGC GGCTCGGGCA CCTACGTCCG GGAGTTCCGG CCCATCCGGC GGGTCTCGCC CGACCGCCTC AAAGCTGCGG TGTGGGGCAA CGGGCGATCC ATCTGGAGCG CGGACCTCGA CGTGCGTCCC CACGTCGGCC GCACCGTGGT GACCGTTGAG GCCCCGTCCA GCCTCATCGC CGATGTGCTC GGCTTGGACG AGGGGGAGCA GGTGGTGACC CGGCGGCGAC GCTTCCTCGT GGACGACAAG CCGGTGCAGC TCGCCACCTC GTACTACCCG GAGAAGCTGG TGCAGGGCTC GGCCATCATG GCTGAGGACA CCGGCGAGGG CGGCTCGTAC GCCCGCCTCA AGGACTTGGG CTATGAACCC GTGCGGTTCC GCGAGGAGCT GCGCACGCGG ATGCCCCGCG AGTCCGAGCG GGAGGAGCTG GAGCTGGCGC AGGGAACGCC TGTCGTCCTG ATCATCCGCA CCGCCTACAC GGCTGATGAC CAGCCTGTCG AGGTGAACGA GATGACGCTC GACTCGGCCG CTTACATCCT CGAGTACAAG TTCACAGCTC AGGGCTGA
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Protein sequence | MVDRHAPASG QHGYRAIADG LRSQIDSGEL APGSKVPGEN ELMALHGVEQ PTARRALEVL KNEGLIIARR GSGTYVREFR PIRRVSPDRL KAAVWGNGRS IWSADLDVRP HVGRTVVTVE APSSLIADVL GLDEGEQVVT RRRRFLVDDK PVQLATSYYP EKLVQGSAIM AEDTGEGGSY ARLKDLGYEP VRFREELRTR MPRESEREEL ELAQGTPVVL IIRTAYTADD QPVEVNEMTL DSAAYILEYK FTAQG
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