Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1272 |
Symbol | |
ID | 8325449 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 1411087 |
End bp | 1411725 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644941817 |
Product | protein of unknown function DUF218 |
Protein accession | YP_003099070 |
Protein GI | 256375410 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCTGC TGGCCAGGCT CCGCCGCTAC GTCCAGAGAA CCCTGCTGGG CGGCATCGCG ATCGTCCTGA TCGTCACAGG GGGCACGACG TTCCGGGTCT GGCAGGTGGC CAGGGACGAC GACCGCACGC ACGCGGACAT GGCGGTGGTC CTGGGCGCCG CGCAGTACAA CGGGGTCCCC TCGGACGTCC TGGCCGCCCG GCTGGAGCAC GCGCGCAGGC TCTACGAGCA GGACGTGGTG GACTACATCG TCACCACCGG CGGCCGTCAG CCCGGCGACA ACTTCACCGA GGGCGAGGCG GGCCGGATCT GGTTGGAGGA GCGCGGGGTG CCCGCCGACC GGGTGATCGA GATCGGCGAG GGCACCGACA CGCTGGGCAG CATCAAGGCC GTCGCGGTGC GGGCGCACGA GCGCTCGCTG CGGACCGCGG TGATCGTCAG CGACCCGTGG CACTCGCTGC GGGCCCGCAC CATGGCCGAG GACCAGGGCC TGGACGCGTG GACGTCGCCG ACGCGCAGCG GCCCGAACGT GCAGACCCGC GAGATGCAGC TCTACTACAT CCGCCGCGAG ACCATGGCGC TGATGTACTA CCACCTGCTC AAGGCCCCGG TGGACGCCGT GGACGACATC CCGATCTAG
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Protein sequence | MTLLARLRRY VQRTLLGGIA IVLIVTGGTT FRVWQVARDD DRTHADMAVV LGAAQYNGVP SDVLAARLEH ARRLYEQDVV DYIVTTGGRQ PGDNFTEGEA GRIWLEERGV PADRVIEIGE GTDTLGSIKA VAVRAHERSL RTAVIVSDPW HSLRARTMAE DQGLDAWTSP TRSGPNVQTR EMQLYYIRRE TMALMYYHLL KAPVDAVDDI PI
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