| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1182 |
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| Symbol | |
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| ID | 8325359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1321629 |
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| End bp | 1322525 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 78% |
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| IMG OID | 644941727 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_003098980 |
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| Protein GI | 256375320 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00699622 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTCCCCG CGCTCGGCGC CACGGCCGTC GTCGTGCTCG GCGATGGGCC GCTGGCCGAG
GCGGAGGCCC TGGTCAGGGC CGAGGTGCGG GCGGTGGACG AGGCGTGCAG CCGGTTCAGG
GCGGACTCGG AGATCAGCGC GGTGCACCGG GCGGCCGGGC GCGAGGTCGA GGTGTCGCCG
CTCCTGGCGG AGGCGGTCGG CACGGCGCTG CGGGCGGCGG AGCTGACCGG CGGGCTGGTC
GACCCGACCG TGGGCACGGC GCTGTGCGCG CTGGGCTACG ACCGGGACTT CGCGCAGGTC
AGGCGGATCG ACCCGCGCCC GGTGGAGCCG GTGCCCGCGC CCGGCTGGTG GCGGGTGGGC
CTCGACGCGG CCGGGTCGCG GCTGGTCGTG CCGCGCGGGG TGCTGCTGGA CCTGGGCGCG
ACGGCGAAGG CGCTGTGCGC GGACCGGGCG GCGCGCGCGG TGTCGGCGGC GCTGGGCTGC
GGGGTGCTGG TCTCGCTGGG CGGGGACCTG GCCACCGCCG GAACTCCACC CGAAGGTGGC
TGGCACATAG GTGTGGGTGA CGACCACGTG GGGCTCGCGT CGCAGATCGT GACGATCCGG
TCGGGTGGGC TGGCCACGTC GGGCACGGTG CGGCGGCGCT GGAAGCGCGC CGGTCGTGTG
GTGCACCACA TCATCGACCC GCGCACCGGG GACGTGCCCG CGCCGTGCTG GCGGACGGCC
AGCGTGGTCG CGGTGGACTG CGTGACGGGG AACACGGCGA GCACCGCCGC GGTGCTGCTG
GGGGAGGACG CGCCCGCGTG GCTGGCCGAG CGGGGGCTGC ACGCCCGGCT GGTCGGCGAG
GACGGGCGGG TCGTGGAGGT CGGCGGCTGG CCCGCCGAGA GGAGGAGCGC GGCGTGA
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| Protein sequence | MFPALGATAV VVLGDGPLAE AEALVRAEVR AVDEACSRFR ADSEISAVHR AAGREVEVSP
LLAEAVGTAL RAAELTGGLV DPTVGTALCA LGYDRDFAQV RRIDPRPVEP VPAPGWWRVG
LDAAGSRLVV PRGVLLDLGA TAKALCADRA ARAVSAALGC GVLVSLGGDL ATAGTPPEGG
WHIGVGDDHV GLASQIVTIR SGGLATSGTV RRRWKRAGRV VHHIIDPRTG DVPAPCWRTA
SVVAVDCVTG NTASTAAVLL GEDAPAWLAE RGLHARLVGE DGRVVEVGGW PAERRSAA
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