Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1125 |
Symbol | |
ID | 8325300 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 1245171 |
End bp | 1245803 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644941671 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003098926 |
Protein GI | 256375266 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGAGG AGACCACGCC CAAGCGCAGA CGAGCACCGG CGATGAGCCA GGAGGAGCGC AGGGACGCGA TCGTCCAGGC GACGCTCCCC CTGCTCGAAC TGCACGGCGC CAACGTCACC ACCAGCCAGA TCGCCCAGGC GGCAGGCATC GCCGAGGGCA CGGTCTTCCG GGCGTTCAAG GACAAGCAGG AGCTGATCCA CGCCTGCGTC CACGAGGCGC TGTCCCCCGA ACCGGTGATC GACCTGCTCG ACCGGACCGC GAGCCTCCCG GACCTCCGGG ACCGCGCGAT CTGGACGATC AACGCCCTCT CCAGCTACCT GGAGCGGATG TGGTCGCTGG CCGGGGTCCT GCGCGAGAGC GGGTTCGACC CGCACGACAA GAGCGGCGGC AAGCACAAGA ACCCCGGCGA GCACTTCGAG CGGCTGCACA GCAGGGCCGC CGCCGTGTTC GAGCCGGACG CCGACCGCCT CGCCGTCGAG CCCGCGCTCG CCGCGAAGCT CCTGCTCGGC CTGGTCATGG CCAACCGGGC CCGCCCCGGC GCGCCCACCA CCGGGGCGGA CGCCTCACCG GAGCAGCTCG TCGATCTCTT CCTGCACGGT GCGCTGAGGG GGACCCGATG CACGACCTCA TGA
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Protein sequence | MPEETTPKRR RAPAMSQEER RDAIVQATLP LLELHGANVT TSQIAQAAGI AEGTVFRAFK DKQELIHACV HEALSPEPVI DLLDRTASLP DLRDRAIWTI NALSSYLERM WSLAGVLRES GFDPHDKSGG KHKNPGEHFE RLHSRAAAVF EPDADRLAVE PALAAKLLLG LVMANRARPG APTTGADASP EQLVDLFLHG ALRGTRCTTS
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