Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_1088 |
Symbol | |
ID | 8325262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 1208870 |
End bp | 1210285 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 644941634 |
Product | putative phytochrome sensor protein |
Protein accession | YP_003098890 |
Protein GI | 256375230 |
COG category | [K] Transcription [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3284] Transcriptional activator of acetoin/glycerol metabolism |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGGTG ACCCCCTTCT GCTCGCGCGC GAGCACGAGG CGGCGCTGGC CGGTGGTCCC GCCCCCGGCA CGCGGCCGGT GATCCTGGAG TCGTGGCGGC GCTCGCTGGC GGCCCGCGTC GACCCGGACA GCCGCGAGGC CCCGCTGGTG CTGGACCGGG ACGAGGTGGT GGACCTGCGG GCCGCGCACC CGCTGGCGCA GGCGCTGCCG GTGCTGCGGG AGACGCTGGT GAGCATCGCG GACGACGCCG AGCACGTCAT GATCATCACG GACGCGGACG GCCGGGTGCT GTGGTGCGAG GGCTCGGCGC GGGTGCGCGG GGTCGCCGAG CGGGTGCGCC TGACCGAGGG CGCCCGGTGG AGCGAGGACG CGATCGGCAC CAACGCGATG GGACTGGCGC TGGCCACCGG CGGCCCGGTG ACCGTGCACT CGGCGGAGCA CCTGGTGCGC ACCTGCCACG GCTGGACCTG CGCGGCGAGC CCGGTGACGG ACCCGGACAG CGGGCGCACC CTGGGCGTGG TGGACGTGAG CGGGCCGCTG ACCAGCCTGC ACCCGGCGAT GCCCGCGCTG GTGTCGGCGG CGGCGCGGCT GGCCGAGGGG CACCTGCGGA CCAGGCTCGC CGAGCGCGAC GAGCGGCTGC GGTCGGCGAA CATGCGGCAC CTGCTGGCGC TGCGCGGCGG TCCTGGCGCG CTGCTGAGCC AGACCGGCCG GGTGCTGGCC GCCGAACCGG GCACCGAGCT GAGCGGCCGG GTCGACGTCG GCCGGGACCG GGTGCGGCTG GCCGACGGGC GCACCGGGGT GCTGGAGCCG CTGGACGAGG GCTACCTGCT GCGGGTGGAG CGGGGCGCGC GGCGCAGGCC GGTGCTGTCG CTGCGCTTCC TCGGCGAGCC GACCGCGGCC CTGGACGGCG ACGAGGTCGC GCTGACCCTG CGGCACGCGG AGGTGCTGGT CGCGCTGGCG CTGCACCCGC GCGGGCTCAC CGCCGACCAG CTGGCGCTGC GGCTGTACGG GGAGCGCGGC AACCCGGTGA CCGTGCGCGC GGAGCTGCAC CGGCTGCGGG CGCAGCTCGG CGGGGTGCTG CTGACCAGGC CGTACCGGTT GGACGCCGAG GTGCGCGGGG ACTTCCTGGC GGTGCGGGCG GCGCTGCGCT CGGGTGACGT GACCGCCGCG GCCTCCGGGT ACGGGGACGA GCTGCTGCCG CGCTCGGACG CGCCGGTGGT GCGGGCGGAG CGGGAGGACC TGGCGGCGGC GGTGCGGCGG ACCGTCCTGG ACCGGGGCGA CGCGGAGGCG CTGTGGCGGT TCGCCCGCGA CGAGGACGCC GAGGCGCTGG ACCGGCTGGC CAGGCTGCTG CCCAGGGCAG ACCCGAGGCG GGAGCTGGTG GTGTCGCGGC TGCGGCGGGT GCTCGCCGAG GCGTGA
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Protein sequence | MRGDPLLLAR EHEAALAGGP APGTRPVILE SWRRSLAARV DPDSREAPLV LDRDEVVDLR AAHPLAQALP VLRETLVSIA DDAEHVMIIT DADGRVLWCE GSARVRGVAE RVRLTEGARW SEDAIGTNAM GLALATGGPV TVHSAEHLVR TCHGWTCAAS PVTDPDSGRT LGVVDVSGPL TSLHPAMPAL VSAAARLAEG HLRTRLAERD ERLRSANMRH LLALRGGPGA LLSQTGRVLA AEPGTELSGR VDVGRDRVRL ADGRTGVLEP LDEGYLLRVE RGARRRPVLS LRFLGEPTAA LDGDEVALTL RHAEVLVALA LHPRGLTADQ LALRLYGERG NPVTVRAELH RLRAQLGGVL LTRPYRLDAE VRGDFLAVRA ALRSGDVTAA ASGYGDELLP RSDAPVVRAE REDLAAAVRR TVLDRGDAEA LWRFARDEDA EALDRLARLL PRADPRRELV VSRLRRVLAE A
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