| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1079 |
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| Symbol | |
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| ID | 8325253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 1198874 |
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| End bp | 1201366 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 80% |
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| IMG OID | 644941625 |
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| Product | Tetratricopeptide TPR_4 |
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| Protein accession | YP_003098881 |
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| Protein GI | 256375221 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGCGCCG TGGACCGGAC GCCCTCCCCC GCCCAGCTGC TCGACCCGCT GCGCGCCGTC
GTGCCCCTGC ACGGGCGCAC CGCCGAGCTG GGCAGGTTGC GGCGCTGGCG GGACAGCTCG
CGCGGCCCGT CCCTGCTGCT GCTGCACGGG CCGTCCGGGG TCGGCAAGAC CCGGCTCGCG
CACGAGGCGG GCGTCGTCGC GGTGGTCGAC GACGCGGACC TGGTCCCCGC CTCCGACCTG
CGCGGGGCGC TCGCCGAGCA CCCCCGGCTG CTGCTCATCG CGCGCGACGC GGGCTGGTGG
TGGTCGGCGG CCAGGCAGCG CGCCGCGGAC CTCGACCACA CCTGCGGCGA GCTGCGGCTC
GACCCGGACC CCGGCGACTT CGCCCAGGCC TGCGGCTACT ACGCGTCCGC GCTCGGCCTG
CCCGCCCCGA ACCCGCTCGC GGGCACGATC ACCGGCGCCC GCGCCTCGGG CGGCGCGGAT
TCGGCGTTCC GCACGGCGTT CGACCTGCAC CTGGCCGCGC TGGCCGAGGT GCACGGCGTG
CGCGGCGGCC AGGTGGAGCT GGTGCGGTGG CTGGTCAGCC TGGACCCCAC CGCCGAACCG
CCGCCCGGAC GGCTCGCCGA GGACGTGCTC GCCGTGGCGC TGCTGGACGA GCGGATCAAC
CCCGAGCGCA CCCCCGGGTC CCTGCAGATC CTGGCGCGCG CCGCCCAGCG CTGGCCGCAC
GTGCTGCACC GGGTGGGGGA GCTGTTCACC GCGCGTCCCG AGCTGGCGTC GACCGCGACC
GCCGCGACCC TGGCGGCCCT GCCGCCGCGC GCGGTGGCGG CGGTGGCCAG GCGGGTGTTC
GACGACGAGC GCTTCCACGG TGACCCGGTG ACCGCCCAGC TCACCCGGGT GCTGCTCGAC
GGCGCGGGCG AGGACCCGGT GGAGCGCGCC GAGCTGCACG GGGTGCTCAG CGCCCGCGCC
GCGCTCGCCC ACCTGCGCGA GGAGGCCGTG GAGGCCGCGC TCGCCGAGGT CGAGCTGTGC
CGGGACCTCG CCGACGCCGA CCCCGTCGAG CACCGCAGCG CGCTGGCCGA CGCGGTCGGC
GACCTCGCGG TGCGCCTGGT CGCCGCCGGG CGGCCGGTGG ACGCGCTGCG CGCCTCGGAG
GAGGCGGTGG CGCTGTGCGA GCTGGCCGCC GCCGAGGACG AGGACTGCCT GCCCAGGCTC
GCCGCCGCGC TGGAGCAGCT CGGGCTGCGG CACGCCGGTC TCGGCGACCA GGCCGCGTCG
CTGCTCGCGC TCACCGAGGC GTGCGCGCTC CAGCAGCGGC TCGCCGAGCA CAACCCGGCG
CTGTTCCGGA TGGACCTGGC CCGCGTCTCG CACCAGCTCG CGGTGCGCGC GTTCGAGTCC
GGGAAGGACG GCGCGCAGGC CACCGACGCG GCGGTGCGCC GGTGGCGGCG GGTCGCGGCG
GACGACCCGC GCTACGAGCC GGACTTCGCC CGCGCCCTGA TGTCCGCCGC CGACCTGCTC
GCCCCGCGCG GGCACCGCGA GCGGGCAAGG GCGCTGGTGG ACGAGGCGAT CTGGGTGCTG
CGGCGGCTGG CCGACGTGAA CCCGACCGCG TTTGGGCCGC AACTGGCCAC CGCGCTGGAG
CGGCTGAGCG GGCTGGCCTC GCCCGCCGAG GTCGGCGAGG CGGTGAAGGC CGCCGGTGAG
GCGGTGCTCG CCCGGCGCGA GCACGCGGCG CGCGGCGAGG AGGGCGCGCT CGCGGCGCTG
GCCGGGGCGC TGGTCGGGCA GGCCGCGCTG CTCACCGGCG GGCAGCGGCT GTGCGCCTCG
CAGGAGGCCG TCGACATCGC CGGGCGGCTG CGCGGGCGCC CGGCCGAGCT GGTCGTGGCG
CGGGTCGGGC TGGCGCGGGC GCTGCTGCGC AACGGGCGCG GGCCCGAGGC GGTCAGCGCC
GTGGACGACG TGCTGGAGGC GGTGCGCGCG CTGCCGAGGC GGGTGCTGGT GGCGCGGGCG
GACCGGGTGA CCGACGCGCT GCACGCCCTC GTCGACGACC TCGCGGGCGC CGACCACGGC
CCCACCGCGC TGAGGCTGGC CGAGCTGGTC GCCGAGCTGT GGCGCGACCT CATCGGCCAC
CACCTGGGCG CGCCGGTCGC GTACGCGGCG GCCGTGCACC GGGTCGCCGA GCACGACCGC
CCGGAGAGCG GCCGGGCGCG GACCGCGGTG CTGCTGTGGC ACCTGGCGCG CGCGCCCGAG
CAGCTGCGCG CCGACCGCCG GTACGCGGAC GCGCTGGCCC TGCACGCCAG GACCGCCGCG
GCGGAGGGCG TCGGGTCGGC GCTGGAGGCG GCGCACCGCG CGGCGACCGT GCTGCGCGAG
TCGGGCGCGC CCGCCGACCT GGTCGTGGGC GCGGTGGACG CGGTGGTGCG CGCCCACCCG
GACCCGGAGG AGGCCAGGGT GCGGCTGCGG GAGCTGGGGG AGCGGGAGCG GTTCAGCGGG
CGGGAGAGCG AGCGCGCGCG GGGCGGGCGC TAG
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| Protein sequence | MCAVDRTPSP AQLLDPLRAV VPLHGRTAEL GRLRRWRDSS RGPSLLLLHG PSGVGKTRLA
HEAGVVAVVD DADLVPASDL RGALAEHPRL LLIARDAGWW WSAARQRAAD LDHTCGELRL
DPDPGDFAQA CGYYASALGL PAPNPLAGTI TGARASGGAD SAFRTAFDLH LAALAEVHGV
RGGQVELVRW LVSLDPTAEP PPGRLAEDVL AVALLDERIN PERTPGSLQI LARAAQRWPH
VLHRVGELFT ARPELASTAT AATLAALPPR AVAAVARRVF DDERFHGDPV TAQLTRVLLD
GAGEDPVERA ELHGVLSARA ALAHLREEAV EAALAEVELC RDLADADPVE HRSALADAVG
DLAVRLVAAG RPVDALRASE EAVALCELAA AEDEDCLPRL AAALEQLGLR HAGLGDQAAS
LLALTEACAL QQRLAEHNPA LFRMDLARVS HQLAVRAFES GKDGAQATDA AVRRWRRVAA
DDPRYEPDFA RALMSAADLL APRGHRERAR ALVDEAIWVL RRLADVNPTA FGPQLATALE
RLSGLASPAE VGEAVKAAGE AVLARREHAA RGEEGALAAL AGALVGQAAL LTGGQRLCAS
QEAVDIAGRL RGRPAELVVA RVGLARALLR NGRGPEAVSA VDDVLEAVRA LPRRVLVARA
DRVTDALHAL VDDLAGADHG PTALRLAELV AELWRDLIGH HLGAPVAYAA AVHRVAEHDR
PESGRARTAV LLWHLARAPE QLRADRRYAD ALALHARTAA AEGVGSALEA AHRAATVLRE
SGAPADLVVG AVDAVVRAHP DPEEARVRLR ELGERERFSG RESERARGGR
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