| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1055 |
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| Symbol | |
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| ID | 8325228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1172496 |
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| End bp | 1174124 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644941600 |
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| Product | ABC transporter related |
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| Protein accession | YP_003098857 |
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| Protein GI | 256375197 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.242614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCCA CTCTCGTCGC CAAGGACCTG GCCGCCGGGC ACGGCGACCG CGTGCTGTTC
TCCGGCCTGG ACCTGGTGGT CGCGCCGGGG GACGTGGTCG GTCTGGTCGG GGTGAACGGC
GCGGGCAAGT CGACGCTGCT GCGCACCCTG GCGGGCCTCG TCCCGGCCGA GTCCGGTGTG
ATCCGCCTCT CCCCCGCGTC CGCGACGGTG GGGCACCTGC CGCAGGAGCC CGAGCGGCGT
CCGGATGAGA CGGTGCGGGA CTTCCTGGCG CGCCGCACCG GGGTCGCGCA CGCCCAGGCG
GAGCTGGACC GGCTGACCGA GCTGCTGTCG GAGGGCGTGG ACGAGGGGTA CTCGGAGGCG
CTGGAGCGGT GGCTCGCGCT CGGCGGGGCG GACCTGGCCG AGCGGTCCGA GGAGGTCGCC
GCCGAGCTGG GGCTGGGCGT GGACCTGGAC CAGCCGATGA CCTCGCTGTC CGGCGGGCAG
GCGGCGCGGG CGGGCATGGC GTCGCTGCTG CTGAGCCGGT ACGACGTGTT CCTGCTCGAC
GAGCCGACCA ACGACCTCGA CCTGGACGGG CTGGAGCGCC TGGAGGCGTT CGTCACCGGG
TTGCGGGCGG GCGCGGTGCT GGTGTCGCAC GACCGGGAGT TCCTGGCGCG CACCGTGACT
CGGGTGGTGG AGCTGGACCT GGCGCAGGGC CAGGTGCGGT CCTACGGCGG CGGGTACGAG
TCGTACCTGG AGGAGCGCGA GATCGCCCGG CGGCACGCGC GCGAGGACTA CGAGGAGTAC
GCGGACAAGC GCTCGGACCT GGAGGAGCGG GCCAGGACGC AGCGCTCGTG GATGGAGAAG
GGCGTGAAGA ACGCCCGGCG CAAGTCCACC GACAACGACA AGGTCGGCCG CAAGTTCCGC
TCCGAGTCGA CCGAGAAGCA GGCCGCGAAG GCCAGGCAGA CCGAGCGGCT GATCGAGCGG
CTGGACGTGG TCGAGGAGCC CCGCAAGGAG TGGGAGCTGC GGATGGAGAT CGCCTCGGCC
CCGCGCTCGG GCGCGGTCGT GGCGGTGCTG CGCGGCGCGG TCGTGCGGCG CGGCGGCTTC
ACGCTGGGGC CGGTCGACCT GCAGGTGGAC TGGGCGGACC GGGTCGCGAT CACCGGGGCG
AACGGCGCGG GCAAGTCGAC GCTGCTGGCC GCGCTGCTGG GCCGGGTCGA GCTGGCCGAG
GGGTCGGCGT CGCTGGGACC GGGCGTGGTG GTCGGCGAGG TCGACCAGGC GCGCGGGCTG
TTCCTGGGCG AGCTGCCGCT GGCCGACGCC TTCGGCGCCG AGGTGCCCGA CCTGCCGTCG
GCGGAGGTGC GCACGCTGCT GGCGAAGTTC GGCCTGAAGG CGGACCACGT GCTGCGCCCG
GCCGCGTCGC TGTCACCGGG CGAGCGCACC CGCGCGGCGC TCGCGCTGCT CCAGGCGCGC
GGGGTGAACC TGCTGGTGCT GGACGAGCCG ACGAACCACC TCGACCTGCC CGCGATCGAG
CAGCTGGAGT CGGCGCTGGA GAGCTTCACC GGCACCCTGC TCCTGGTCAC CCACGACCGC
AGGATGCTCG CCACGATGCG AACGACCCGC CGCCTGGAAG TGGCGGCGGG TCGCGTCGCG
GACCGCTGA
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| Protein sequence | MSATLVAKDL AAGHGDRVLF SGLDLVVAPG DVVGLVGVNG AGKSTLLRTL AGLVPAESGV
IRLSPASATV GHLPQEPERR PDETVRDFLA RRTGVAHAQA ELDRLTELLS EGVDEGYSEA
LERWLALGGA DLAERSEEVA AELGLGVDLD QPMTSLSGGQ AARAGMASLL LSRYDVFLLD
EPTNDLDLDG LERLEAFVTG LRAGAVLVSH DREFLARTVT RVVELDLAQG QVRSYGGGYE
SYLEEREIAR RHAREDYEEY ADKRSDLEER ARTQRSWMEK GVKNARRKST DNDKVGRKFR
SESTEKQAAK ARQTERLIER LDVVEEPRKE WELRMEIASA PRSGAVVAVL RGAVVRRGGF
TLGPVDLQVD WADRVAITGA NGAGKSTLLA ALLGRVELAE GSASLGPGVV VGEVDQARGL
FLGELPLADA FGAEVPDLPS AEVRTLLAKF GLKADHVLRP AASLSPGERT RAALALLQAR
GVNLLVLDEP TNHLDLPAIE QLESALESFT GTLLLVTHDR RMLATMRTTR RLEVAAGRVA
DR
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