| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_1047 |
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| Symbol | |
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| ID | 8325219 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 1162498 |
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| End bp | 1165584 |
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| Gene Length | 3087 bp |
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| Protein Length | 1028 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 644941591 |
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| Product | Non-specific serine/threonine protein kinase |
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| Protein accession | YP_003098849 |
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| Protein GI | 256375189 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00746664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCCGTTGC GGTTGGTGGT GCAGTTGCCC ACCGCTGGGA CCGGGCCGAT CGCTTCCCCG
GAGCTGGTGG GGGCTTCCGG GGCCGCGGCT GCGGTGCGTG GGACACCTCG GTTGCACTCC
TGGTTGGTTC CGGCGGTGCG GGTGGAGGGG CTGCCCGAGC GGATCGTGGA CGGCAGGCTT
GGGGCTTCGG CTCGGTTCTA CCTGGAGGTC CTCGCGTTCG CCGACGACCT GGTGGCCAGG
GGGCGCGTGG TGCCCGGTGT GGACGGTGGG GCGGCGCGGT GGCGGGCGGT GTTGTCCGGG
GTGGACGCGG TGCGGTTCGC CGCGTTGCGG GCGGGGATGC CTCCCTCGTT CCGGGCGGCT
CAGGAGTCCG TTGAGCCGGA TCGGCTCACC AGGGCCGCGC TCGACCGGGC AGTGGACCGG
CGGGTTCGGG ACGGGGACTT CTCCGGGGTC GACCTCGACG AGCCCGGCGC CACGGGGATC
TGGTTGCGGG CGCTGGTCGG CAACCCGGTG CTGGGCGCGG CCAGCGGGGC CGTGGCCAGG
CTTCGGGAGC GGGTCGAGCA CTGGCAGGGC AGTGCGCTGC GACGTCCGCT GCTGCGGACC
TGCTTCCGGT TGACCGCGCC CGATCAGAGC GTCGCCGACG AGGACGTCAG CGCGGGGCCC
GGTCCGGGCG GGGACGGGGG TGGGCGGTGG GAGCTGGAGT TCCTGGTGCA GGCCGTCGAC
GAGCCGAGCG TCGTGGTGCC CGCCGAGCAG TTGTGGTCGC GGGGGAACAA CGTCCTGCGC
CGGTTCGCCA CCCGGCCGGA GGACGTGCTG CTCGCCGACC TCGGGCGGGC CAGTCGGCTC
TACCCGGCGC TCGACCGGGC GCTGGGCGAG CAGCGGCCCG CGCGGCTGGT GCTGGACGTG
GCGGGCGCGC ACGACTTCCT GGTGCGCGCG AACGAGCTGT CGCAGGCCGG GTTCGGGGTG
CTGGTGCCCT CGTGGTGGCG CGAACCCCGA CGGGTCGGGC TGGCCCTGTC GGTGTCCGGT
GGTGGGGACG GGACCGGGTG GGGTGCGGCT GGGCAGGGTG CGGCTGGGCA GGGTGCGGCG
GGGCTGGGCG GGGCTGGGCG GGGTGGGGCC GCCGGGGCGG TGCCCAAGGA GAGCTCGCTC
GGGTTGAAGG TGCTGCTGGA CTACCGGTGG TCGTTGGCGC TCGGGGACGA GGAGCTGGCC
GAACCCGAGC TGCGGGCGCT GGCCGAGGCG AAGGTGCCGC TGGTGCGGTT GCGCGGGCAG
TGGGTGCAGG TCGACCAGCG TGGACTCACC GCCGGGCTCG CGTTCCTGCG GCGCGGTGGT
GGCGGGCGGA TGACGGTGGG GCAGGCGCTC GCCCACGCGG GCGCGCTGAC CCGGCCGGCC
GGCAGGAACA CCCATGACGA GAACACCGGT GACGAGAACA CCGATGACGA GAACGCCGGT
GACAAGACCA TGACCAGCGC TGCGAACCTC GATGGCGCGA ATCCCCGTGA GAGCAACGGC
AACGGCAGTG GTGGCAGCGA TCCCGACGGC CTCCCCCACG GCTGGTTCGG GGCGCTGCCC
CTGCCCGTCA CCGCCGTGCG CGGGGACGGG GCGCTGGGGG CGTTGCTCGC CGGGGGCGGG
GATCGGGTGC TGGAGGAGGT CGCCGCGCCC GAGGGGTTGA CCGCCGTGCT CCGGCCCTAC
CAGGCGCGGG GGTTGGCGTG GTTGGCGTTC CTGGACTCGT TGGGGCTCGG GGCGTGCCTG
GCCGATGACA TGGGGCTCGG CAAGACCGTG CAGCTGCTCG CCCTCGAAGC CCTGTGCCGT
CAGGGGGACG GCGGGTCGCG GGCGCCCACG TTGCTGGTCT GCCCGCTCTC GGTGCTCGGG
AACTGGCAGC GGGAGGCCGC GCGGTTCACG CCCGGTCTTC GGGTTCGGGT GCACCACGGG
CCCGAGCGGG ACGTGAGCGG GATCGGTGAG GGGTGCGACC TGGTGCTCAC CACGTACGCC
GTGGTGGTGC GGGACGTCGA GGCGCTGCGC GGCGTGCGGT GGGACCGGGT GGTGCTGGAC
GAGGCGCAGA ACGTGAAGAA CAGCTCCACC CGCCAGTTCC GGGCCGTGCG GTCGCTGGAC
GCGCGGCACC GGGTCGCGCT GACCGGCACG CCCGTGGAGA ACCGGCTGGC CGAGCTGTGG
TCCGTCATGG ACTTCGCCAA CCCCGGCGTG CTCGGCACGG TGAGCACCTT CCGGGCGCGC
TTCGCCGTGC CGGTGGAGCG GCACGGGGAC GAGGACGCGG CGGTGCGGCT GCGGCGGGTC
ACGGCGCCGT TCGTGCTGCG CAGGCTCAAG ACCGATCCCA GGGTCATCTC CGACCTGCCC
GACAAGATCG AGGTCAAGCA GCTCTGCCCG CTCACGCCCG AGCAGGCGTC GCTGTACCAG
GCGGTGCTGG ACGACATGCT CGCCAAGGTC GACGGGTCGG AGGGGCAGGA GCGGCGCGGG
CTGGTGCTGG CGTCGCTGTC CAAGCTGAAG CAGGTGTGCA ACCACCCGGC CCAGCTGCTC
GGCGACGGCT CGCGGGTGGC CGGGCGGTCC GGGAAGGTCA ACCGGTTGGA GGAGGTGCTG
GAGGAGGTGC TCGCCGACGG GGACAAGGCG CTGTGCTTCA CCCAGTTCAC CGAGTTCGGG
TCGCTGCTGG CGCCGCACCT GTCGGCGCGG TTCGACACGG ACGTGCTGTT CCTGCACGGG
GGCACGCCCA AGCGCGCGCG GGACGCGATG GTCGAGCGGT TCCAGGGCGA GGGCGGGCCG
TCGGTGTTCC TGCTGTCGCT GAAGGCCGGT GGCACGGGGC TGAACCTGAC CGCGGCCAAC
CACGTGATCC ACCTGGACCG GTGGTGGAAC CCGGCGGTGG AGGACCAGGC GACGGACCGG
GCGTTCCGGA TCGGGCAGCG CAGGCACGTG CAGGTGCGGA AGTTCGTGTG CGCGGGGACG
GTGGAGGAGC GGATCGACCG GATGGTGGAG CAGAAGCGCG GGCTGGCGCG GATGGTGGTC
GGCACGGGCG AGGACTGGAT CACCGAGCTG TCGACCGGGC AGCTGCGCGA GCTGCTGTCG
CTGACCGGGG AGGTCTTCGA TGAGTAG
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| Protein sequence | MPLRLVVQLP TAGTGPIASP ELVGASGAAA AVRGTPRLHS WLVPAVRVEG LPERIVDGRL
GASARFYLEV LAFADDLVAR GRVVPGVDGG AARWRAVLSG VDAVRFAALR AGMPPSFRAA
QESVEPDRLT RAALDRAVDR RVRDGDFSGV DLDEPGATGI WLRALVGNPV LGAASGAVAR
LRERVEHWQG SALRRPLLRT CFRLTAPDQS VADEDVSAGP GPGGDGGGRW ELEFLVQAVD
EPSVVVPAEQ LWSRGNNVLR RFATRPEDVL LADLGRASRL YPALDRALGE QRPARLVLDV
AGAHDFLVRA NELSQAGFGV LVPSWWREPR RVGLALSVSG GGDGTGWGAA GQGAAGQGAA
GLGGAGRGGA AGAVPKESSL GLKVLLDYRW SLALGDEELA EPELRALAEA KVPLVRLRGQ
WVQVDQRGLT AGLAFLRRGG GGRMTVGQAL AHAGALTRPA GRNTHDENTG DENTDDENAG
DKTMTSAANL DGANPRESNG NGSGGSDPDG LPHGWFGALP LPVTAVRGDG ALGALLAGGG
DRVLEEVAAP EGLTAVLRPY QARGLAWLAF LDSLGLGACL ADDMGLGKTV QLLALEALCR
QGDGGSRAPT LLVCPLSVLG NWQREAARFT PGLRVRVHHG PERDVSGIGE GCDLVLTTYA
VVVRDVEALR GVRWDRVVLD EAQNVKNSST RQFRAVRSLD ARHRVALTGT PVENRLAELW
SVMDFANPGV LGTVSTFRAR FAVPVERHGD EDAAVRLRRV TAPFVLRRLK TDPRVISDLP
DKIEVKQLCP LTPEQASLYQ AVLDDMLAKV DGSEGQERRG LVLASLSKLK QVCNHPAQLL
GDGSRVAGRS GKVNRLEEVL EEVLADGDKA LCFTQFTEFG SLLAPHLSAR FDTDVLFLHG
GTPKRARDAM VERFQGEGGP SVFLLSLKAG GTGLNLTAAN HVIHLDRWWN PAVEDQATDR
AFRIGQRRHV QVRKFVCAGT VEERIDRMVE QKRGLARMVV GTGEDWITEL STGQLRELLS
LTGEVFDE
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