Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0899 |
Symbol | |
ID | 8325063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 990578 |
End bp | 991321 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644941440 |
Product | AAA ATPase |
Protein accession | YP_003098705 |
Protein GI | 256375045 |
COG category | [R] General function prediction only |
COG ID | [COG3910] Predicted ATPase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.938008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGTTCGTCA GCGGGGCCTA CGTGCCTGAG TCCTTCCGTC CCGACGACTA CCGGGAGTGG CCTTACACGA TCCCCGCGGT CGCGCAGGTC GTCGAGCAGG GATTGGAGTT CACCCACCCG GTGACCTTCC TCGTCGGGGA CAACGGGTCC GGGAAGTCGA CCCTGGTCGA GGCCATCGCC GAGGGGTTCA AGCTGGACGC GCGCGGCGGA CGGGCAGCCC GGAAGTCCGG CGGCCCTGAC CTGGGGAAGA CCGCCTTGGG CGAGGTGCTG CGCCTGGAGA CCACCGCCAG GGGCGCCCGG ATGCTGGCCG GCCCGAGGCT GCGCAAGAAG GGCTTCTTCC TGCGCGCCGA GACAGCGTTC AGCATGACCG AGAACCTCGG AGGCGTCCCC GGCTACTGGG ACGAGGACAC CGCCGAACTG AGCCACGGCG AGGGCTTCCT CGCCATCTTC CGATCCATGT TCCGCGACCC CGGCTTCTAC GTCATGGACG AACCCGAATC GGCGCTGTCG TTCACCGCCT CGCTCCAACT GGTCGCCCTG ATGCACGACC TCGGCCGGTC CGGGGCGCAG GTGGTCTGCG CGACCCACTC CCCCATCCTC GCCGCCACAC CGGGAGCGGA CGTCATCGAG GTCGGAGAGC ACGGGCTGCG ACGCGCCCGG TGGGCCGACC TCGACCTGGT CGCGGGGTGG CGCCGGTACC TTGAGAACCC CGACGCCTAC CTGCGGCACC TCGTCGACGA GTGA
|
Protein sequence | MFVSGAYVPE SFRPDDYREW PYTIPAVAQV VEQGLEFTHP VTFLVGDNGS GKSTLVEAIA EGFKLDARGG RAARKSGGPD LGKTALGEVL RLETTARGAR MLAGPRLRKK GFFLRAETAF SMTENLGGVP GYWDEDTAEL SHGEGFLAIF RSMFRDPGFY VMDEPESALS FTASLQLVAL MHDLGRSGAQ VVCATHSPIL AATPGADVIE VGEHGLRRAR WADLDLVAGW RRYLENPDAY LRHLVDE
|
| |