Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0782 |
Symbol | |
ID | 8324945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 861347 |
End bp | 862234 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644941325 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003098590 |
Protein GI | 256374930 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.876045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTATGGTT ACGGCGTGGA GAACAGCAGC TCAGGGGTGG CGGAGACAGC GGAAACCCAG GTCACGGGCG TGGGCGCGGG TGACGCGGGG GTGAGCGCAG GCGCGCGTGA CGCGGGCGTG GACGTCCCGC ACGCGGCTGG TGAGAGCGCG GCCGAGGCTC CCGCGCGCAA GCCCGCCCGC AGGCGGAACC GGCGGGGCGA GGGGGCCAAG CTGCGGGAGG AGATCGTCGA CGCCGCCACC GCGATCCTGG ACGAGGAGGG TGACGAGCGG CTGGTCACGC TGCGGTCGGT CGCGCGGCGG ATCGGCATCG CCGCGCCGTC CATCTACCCG CACTTCCCCG ACCAGCCGTC GATCATGATG GCGGTGGTGC GGCGGGAGTT CGAGGCGCTG GCCGGGCAGC TGCGGGAGGC CCGCGACCGG GAGGTCGACC CGCGCGAGCG GCTGGTCGCG ATCTGCCTGG CCTACCTGGA GGTCGCCCGC GCCCACCCCG GCCGGTACCG GACCATGTTC GGCGGGCTCT GGATGCCCGA CCTGGACACC GGCTCGATCA CCGCCGAGGA GCTGATGTCC CTGGGCAACG AGCCCCTGGA GGTGCTGGTC GTGGCGCTGG AGGCGTGCGT GGAGGCCGGT CAGGCCACCA GCGACGACCT GTTCGCCGAC GCGGTCGCGC TGTGGATGGG GCTGCACGGG CTCGCCCACC AGCGGTCGGT CACCCGCGCG TTCCCCTGGC CGGACGACAT CGAGCTGCGG ATCATCGGCG CGCTCGCGCA CCTCACCGGG ACGGGCGACG GGACCGGTTC GGCCGCACCC CAGCCGGTCA CGCCCCAGCC GGTCACGCCC GAGTCGGCCG GGCCCCAGCC GGTCACGCCC GAGTCGGCCG GGCCCTGA
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Protein sequence | MYGYGVENSS SGVAETAETQ VTGVGAGDAG VSAGARDAGV DVPHAAGESA AEAPARKPAR RRNRRGEGAK LREEIVDAAT AILDEEGDER LVTLRSVARR IGIAAPSIYP HFPDQPSIMM AVVRREFEAL AGQLREARDR EVDPRERLVA ICLAYLEVAR AHPGRYRTMF GGLWMPDLDT GSITAEELMS LGNEPLEVLV VALEACVEAG QATSDDLFAD AVALWMGLHG LAHQRSVTRA FPWPDDIELR IIGALAHLTG TGDGTGSAAP QPVTPQPVTP ESAGPQPVTP ESAGP
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