Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0748 |
Symbol | |
ID | 8324911 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 824446 |
End bp | 825447 |
Gene Length | 1002 bp |
Protein Length | 333 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 644941291 |
Product | ABC transporter related |
Protein accession | YP_003098556 |
Protein GI | 256374896 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCGTTGC GGCTCAACGG GGTCGACGTG CGCTACGGCG ACGTCGAGGC GGTGTCCGGG GTGGACCTGG AGGTGGCGGG CGGCGAGGTC GTCGCGCTGC TCGGGCCGTC CGGGTGCGGC AAGTCCACGC TGCTGCGCGC GGTGGCCGGC CTGGAGCGGG TCAGCGCGGG CGCGGTCACC TGGGACGGGA CCGACCTGGC GGGCACGCCC GTGCACCGCA GGGGGTTCGG GCTGGTCTTC CAGGACGGGC AGCTGTTCCC GCACCGGGAC GTCGCCGGGA ACGTCGCGTT CGGCCTGCGG ATGCGCGGGG CCGCGCGCGG CGAGCGGGAC AAGCGGGTCG CGGAGCTGCT GGAGCTGGTC GGGCTCGGCG GCTACCAGCG GCGGCGGGTC ACCGAGCTGT CCGGCGGTGA GCAGCAGCGG GTGGCGCTGG CCCGCGCGCT CGCCCCCGAT CCGAGGCTGC TGCTGCTGGA CGAGCCGCTG TCCGCGCTGG ACCGGTCGCT GCGCGAGCAG CTGGCGCTCG ACCTGGCGCG GCTGCTGCGG GAGACCGGCG CGACGGCGCT CGTGGTCACG CACGACCACG ACGAGGCGTT CACCCTGGCC GACCGGGTCG CGGTCATGCG CGCCGGGAGG CTGCGGCAGA CCGGGCCGCC CGCGCGGGTG TGGCGGGAAC CGGTGGACGT GGAGACGGCG CGGTTCCTCG GCTGCGGGGT GGTGCTCGCG CCCGAGGCGG CGGAGCGGCT GGTCGGGGTG CGCGCGCGGG TCGGGCTGCG GGAGACGGCG CTGCGGGTGG TCCCGGACGG CCCTGGCGGC CCTGGCAGCG TGCTGGACGC CGTGGTGCTC GGGCGCGTGC ACCGCAGGGA CCACGTGCGC CTGCTGGTGC GGATCGGGGA CGACGAGTTC GACGCGGTCG GCCCGGTGGT CGGGACCTGG GAGCCGGGGG ACCGGGTGCG GCTGGCCGTC GACCAGGACG GGGTCGCGGT CATCGGCTCC GCGACGGGCT GA
|
Protein sequence | MSLRLNGVDV RYGDVEAVSG VDLEVAGGEV VALLGPSGCG KSTLLRAVAG LERVSAGAVT WDGTDLAGTP VHRRGFGLVF QDGQLFPHRD VAGNVAFGLR MRGAARGERD KRVAELLELV GLGGYQRRRV TELSGGEQQR VALARALAPD PRLLLLDEPL SALDRSLREQ LALDLARLLR ETGATALVVT HDHDEAFTLA DRVAVMRAGR LRQTGPPARV WREPVDVETA RFLGCGVVLA PEAAERLVGV RARVGLRETA LRVVPDGPGG PGSVLDAVVL GRVHRRDHVR LLVRIGDDEF DAVGPVVGTW EPGDRVRLAV DQDGVAVIGS ATG
|
| |