Gene Amir_0686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0686 
Symbol 
ID8324848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp760924 
End bp762228 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content79% 
IMG OID644941229 
Productprotein of unknown function DUF58 
Protein accessionYP_003098495 
Protein GI256374835 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGGGC GCGACCGGGA CAGGCCGCCC GGCGCGTGGG GCGCGCCGTG GCGCGGCACG 
GACGCGCTGG CCAGGGGCCT GCTGCTGGGC GTGGTCCTGG TCGTGGCGGG CGTGCTCGCG
CACCGGGTCG TGCTGGTGCT GTTCGGCGCC CCGCTGCTGG TCACCACGGT GCTGGCGCTG
CTCCGGCCGC CCGGCGGCGC GCCGGACGCG CGGGTGCGGC TGCTGTCCCG CGTCGGCGAG
ATCGGCAAGG CGGGCGCGGT GGTCGACGTG GTGGCGGACG GCGAGCTGGT GGCCGTGCGG
CTGCCCGTGC CCGGCCGCGA GGGACCGGGC CCGGTGCACC TGCTGCCCGC GTCGACGACC
GCCGTCAGCG TGGTGCTCGA CCGCTCCACC TGGGGCGACG GGGTGGACGT GCGCCCGGAC
CACCTGGTCG CGGGCCCGGA CGGGCTGGTC GTGCACGGGC CGGTGACCGC GCCCGAGTGG
GGCAGGGCGA TCCTGCCGCC GATCGCGCCC CTGCCCACCG GGCTGCTGCC CGCGCGGGCG
AGGGGCCTGG TGGGCGTGCA CCGCTCGCGC GGGCCGGGCG ACTCGGTGGA GCTGCGCGAC
ATCCGGGCGT TCGCGCCCGG CGACCGGTTG CGCCGGGTGG ACTGGCGGGT GTCGCTGCGC
ACCGGGAACC TGCACGTCCG CGAGCACCAC GCGGAGACCG ACGCCGACGT GGTGCTCGCG
CTGGACACCA GGGCGGACGT GGAGGCGGAC GTCGCGCTGT GGACCGAGAG CGGCCGGGGC
TCGCCGAAGC CCGGCGGGAG CCTGGACCTG GCGGCGCGGG CCGCGGTGTC GCTGGCGGCG
GCGTACCTGC GACAGGGCGA CCGGGTGGGC CTGGTCGACC TGGGCAGGCC TGCGCTGTGG
CTGCGGCCGG GCTCGGGGCG GCGGCAGTTG CTGGCGCTGC GCAGCAGGCT GGTGGCGTGC
GCGCGGGTGG CCGGGTGGGC GCAGCGGCCC GTGCTGGACG CGCGGCAGGC GCCGACCGGC
GCGGTCGTGG TGGTGCTGTC GCCGTTCCTG GACGACGAGG TGGTGGAGGT GGCGGTGCAC
GCGGCGCGGC GTGGCCACCC GGTGCTGGCG GTCGACGTGC TGCCCACCGA CCTGCGACCG
GACCGGGAGA CCGAGTGGGG AGCCGCGGCG CTGCGGGTGG TGGAGCTGGA GCACGAGGTC
CGGGTGACGG CGCTGCGCTC GCACGGCGTG CCGGTGATCC GCTGGGACGG CGAGTCCGCC
GTCGTGGCCA CGGCGCTGCA CGCGACCACC CGACCGAGGC GCTGA
 
Protein sequence
MTGRDRDRPP GAWGAPWRGT DALARGLLLG VVLVVAGVLA HRVVLVLFGA PLLVTTVLAL 
LRPPGGAPDA RVRLLSRVGE IGKAGAVVDV VADGELVAVR LPVPGREGPG PVHLLPASTT
AVSVVLDRST WGDGVDVRPD HLVAGPDGLV VHGPVTAPEW GRAILPPIAP LPTGLLPARA
RGLVGVHRSR GPGDSVELRD IRAFAPGDRL RRVDWRVSLR TGNLHVREHH AETDADVVLA
LDTRADVEAD VALWTESGRG SPKPGGSLDL AARAAVSLAA AYLRQGDRVG LVDLGRPALW
LRPGSGRRQL LALRSRLVAC ARVAGWAQRP VLDARQAPTG AVVVVLSPFL DDEVVEVAVH
AARRGHPVLA VDVLPTDLRP DRETEWGAAA LRVVELEHEV RVTALRSHGV PVIRWDGESA
VVATALHATT RPRR