Gene Amir_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0540 
Symbol 
ID8324699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp583222 
End bp583977 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content76% 
IMG OID644941084 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_003098353 
Protein GI256374693 
COG category[R] General function prediction only 
COG ID[COG3393] Predicted acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00415524 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCTGC ACCACCCCTC CGAGCTGTCC GCGCGCGGCG CGCTGATCCG CTGGTCCGCC 
CAGGTCCTCG TCCCCGGTCG GGACGGGCGC GCGTTCTCCC GCGGCGACGC GGTCGCGGTC
CTCGCCCCCG CGCTCAACCG GCACGACCGG CTCGTCCTGG ACGGCTCCCC CGACGACGTC
CGCGCCCTCC TCGACGAGCA CTACGCCCCC GGCCTGTCGC CGCTGGTCAC CAGCGAGCTG
GCGGCCGGGC TGGGGGTGCC GGTGCGGGCC GCGTTCGGCT GGATGGAGCG CGCCGACCCC
GGCGACCTGC CGGAGCGGGC CCCGGAGTGC GCCTGGCTGC CCGAGTCGGA CTGGCCCGAG
GTGACCGCCC TGCTGGGCGC GGCGAGCCCG CACAGTTACG TGTGGCCAGG TGAGCCGGGT
GCGACCAGGT GGGCCGGGAT CAGGGTCGGC GGGGTGCTCG CCGCGGTGGC GGCCGACGCG
TGGTCCACCG ACGGGGTGGG GTTCATCGGT GGGGTCGCCA CGCATCCGGG GTTCCGCCGC
CAGGGGCTGT CGTCGGTGCT GTGCGCGTTC GTCACCGCCG AGCTGCTGGA GCGGCACGGC
GGGTGCGCGC TCATGGTCGA CCGGAACAAC CCCACCGCGA TCGGCGTGTA CACCCGGCTC
GGGTACGCCT ACCGGGAGCT GTCCGTGCTC GACCCGGACG TGGCGCGGTC CGGTGAGCCG
AAGGCGGGCG GGGTGGCGGG GAAGAGCGCG GCGTGA
 
Protein sequence
MRLHHPSELS ARGALIRWSA QVLVPGRDGR AFSRGDAVAV LAPALNRHDR LVLDGSPDDV 
RALLDEHYAP GLSPLVTSEL AAGLGVPVRA AFGWMERADP GDLPERAPEC AWLPESDWPE
VTALLGAASP HSYVWPGEPG ATRWAGIRVG GVLAAVAADA WSTDGVGFIG GVATHPGFRR
QGLSSVLCAF VTAELLERHG GCALMVDRNN PTAIGVYTRL GYAYRELSVL DPDVARSGEP
KAGGVAGKSA A