Gene Amir_0511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0511 
Symbol 
ID8324670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp550909 
End bp551709 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content70% 
IMG OID644941055 
ProductABC-2 type transporter 
Protein accessionYP_003098324 
Protein GI256374664 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGGACCG CAGCGCTCGG ACTCGCGCGG GGCGGCCTGG AGCTGCGCCA GTTCTTCCGC 
AACACCGCCG GGTTCCTCTT CACCTTCGCC CTGCCGGTGT TCCTGCTCCT GCTGCTCGGC
TCGATCTTCT CCGGGATGAC GCCGTCCGGC GCGGACTTCA CCCAGGAGCA GGAGTTCACC
GCCGGGATGC TCGGCGCGGG CATCATCTCC ACCACGTTCA TCACCCTCGG CGCCGGCATC
GCCCAGGACC GCGAGAACGG CACCCTCAAG CGCCTGCACG GCACCCCGCT GCCGCTCGCC
TCCTACTTCA TCGGCAAGAT CGTCATGGTC CTGGTGCTCA GCCTCGCCGA GGCGGTGCTG
GTGCTGATCA CGGGCGTGCT CGTGTTCGAC GTGGACCTGC CGACCGACCC GGCCCGCTGG
TTCACGTTCG CCTGGGTGTT CGCGCTCGGC ACCGTCTCCT GCGCGCTGCT GGGCATCGCC
GTCAGCTCCG TCGCGGGCTC GGCGCGCTCC GCCCCGACCG TGCTGAACCT GCCCTACGTG
GGACTCCAGT TCGTGTCGGG TGTTTTCATC AGCATCGCGG TCCTGCCGCA GTGGATGGTC
GTGCTCGGCT CGCTGTTCCC GCTCAAGTGG GTCGCGCAGG GGTTCCGCTC GGTGCTGCTG
CCCGAGGGGG CTGCGGTCGT GGAGGTGGCT GGGGCGTGGG AGCACGGGAG GATCGCGCTG
GTGCTGGCGG GCTGGTGCGT CGCGGGCTTG GTGCTGTGCG CGGCCTCGTT CCGGTGGACG
AACGGGCGAA GTGGGGGCTG A
 
Protein sequence
MRTAALGLAR GGLELRQFFR NTAGFLFTFA LPVFLLLLLG SIFSGMTPSG ADFTQEQEFT 
AGMLGAGIIS TTFITLGAGI AQDRENGTLK RLHGTPLPLA SYFIGKIVMV LVLSLAEAVL
VLITGVLVFD VDLPTDPARW FTFAWVFALG TVSCALLGIA VSSVAGSARS APTVLNLPYV
GLQFVSGVFI SIAVLPQWMV VLGSLFPLKW VAQGFRSVLL PEGAAVVEVA GAWEHGRIAL
VLAGWCVAGL VLCAASFRWT NGRSGG