Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0511 |
Symbol | |
ID | 8324670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 550909 |
End bp | 551709 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644941055 |
Product | ABC-2 type transporter |
Protein accession | YP_003098324 |
Protein GI | 256374664 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGGACCG CAGCGCTCGG ACTCGCGCGG GGCGGCCTGG AGCTGCGCCA GTTCTTCCGC AACACCGCCG GGTTCCTCTT CACCTTCGCC CTGCCGGTGT TCCTGCTCCT GCTGCTCGGC TCGATCTTCT CCGGGATGAC GCCGTCCGGC GCGGACTTCA CCCAGGAGCA GGAGTTCACC GCCGGGATGC TCGGCGCGGG CATCATCTCC ACCACGTTCA TCACCCTCGG CGCCGGCATC GCCCAGGACC GCGAGAACGG CACCCTCAAG CGCCTGCACG GCACCCCGCT GCCGCTCGCC TCCTACTTCA TCGGCAAGAT CGTCATGGTC CTGGTGCTCA GCCTCGCCGA GGCGGTGCTG GTGCTGATCA CGGGCGTGCT CGTGTTCGAC GTGGACCTGC CGACCGACCC GGCCCGCTGG TTCACGTTCG CCTGGGTGTT CGCGCTCGGC ACCGTCTCCT GCGCGCTGCT GGGCATCGCC GTCAGCTCCG TCGCGGGCTC GGCGCGCTCC GCCCCGACCG TGCTGAACCT GCCCTACGTG GGACTCCAGT TCGTGTCGGG TGTTTTCATC AGCATCGCGG TCCTGCCGCA GTGGATGGTC GTGCTCGGCT CGCTGTTCCC GCTCAAGTGG GTCGCGCAGG GGTTCCGCTC GGTGCTGCTG CCCGAGGGGG CTGCGGTCGT GGAGGTGGCT GGGGCGTGGG AGCACGGGAG GATCGCGCTG GTGCTGGCGG GCTGGTGCGT CGCGGGCTTG GTGCTGTGCG CGGCCTCGTT CCGGTGGACG AACGGGCGAA GTGGGGGCTG A
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Protein sequence | MRTAALGLAR GGLELRQFFR NTAGFLFTFA LPVFLLLLLG SIFSGMTPSG ADFTQEQEFT AGMLGAGIIS TTFITLGAGI AQDRENGTLK RLHGTPLPLA SYFIGKIVMV LVLSLAEAVL VLITGVLVFD VDLPTDPARW FTFAWVFALG TVSCALLGIA VSSVAGSARS APTVLNLPYV GLQFVSGVFI SIAVLPQWMV VLGSLFPLKW VAQGFRSVLL PEGAAVVEVA GAWEHGRIAL VLAGWCVAGL VLCAASFRWT NGRSGG
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