| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0500 |
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| Symbol | |
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| ID | 8324659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | + |
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| Start bp | 540751 |
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| End bp | 542352 |
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| Gene Length | 1602 bp |
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| Protein Length | 533 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 644941044 |
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| Product | polysaccharide lyase family 8 |
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| Protein accession | YP_003098313 |
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| Protein GI | 256374653 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.346359 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACC TCGACGTCGT CCGGGCCCGC CTGCGCCCGC CGCACCAACC CGGACCCGGC
CTCCCCCCGC TGCCCGACGG CACCTGGGCC GACATCGACT ACGCCGACCA CGACGCCGCC
GACTTCCCGC CGCTGGAGCA CCTCCGCCGC GCCCTGTCGT TACCCGACGG CCAACGCCTC
AAAGCGCTCG AGGCGTGGCG CAGGCTGGCC CCCCGCAGCG ACAACTGGTG GTACAACGAG
ATCGGCGCGC CCCGGCTCGT CGGCGACGCC CTCCTCGGCG CCGACCTCGA CCGCGCCCAG
CGCGCCACCT GGGGCACCTG GCTCGCCGAG CAAGCCGGTC CGGTGCCGAT GACCGGGCAG
AACCTGGTGT GGGCGCAGGG GATCGAGCTG CGCCGGGGCC TCGTCGAGGA CGACCCGGAG
CTGGTCCGCC GCGCGGTCGC CCGCATGTCC GAGGTGCTGC GCACCGGCGA CGGCGAGGGC
ATCCAGGAGG ACCTGAGCTT CCACCAGCAC GGCCCCCAGC TGTACTCCGG CGGCTACGGC
GCCTCGCTGG TCGCCGACCT CGCCCTGTGG GTGCGCGCGG TGCACGGCAC GCCGTGGGCG
TTCGGCGCCG CCGAGGTGCG CCTGCTCGCC GACTTCCTGG TGGACGGCCA GCAGTGGGCC
GTGCACGGCG GCGGCTTCGA CTTCACCACC ATGGGGCGCG AGATCGCCCG CGCCGACGCC
CACCACCGCA CCGCCGACCT GCGCGCCGCC GTGCTGCGCC TGCTGGAGTG CGACCCGCCG
CGCACCGCCG AGCTGACCGC GTTCGACGAC CGCCTCGCGG GCCACGGCGC GCCGCTGGTC
GGCACCCGCT GGTACCCCAG GTCCGACTAC CTGGTGCACC GCAGACCCGG CTGGTCGCTG
TCCGTGCGGA TGTCCTCGGG CCGGACGGTG CCCACCGAGT GCCTGAACGG GGAGAACCTG
CTGGGCCGCC ACCTCGGCGA CGGGGTCGCC GCGCTGCGCC TGGGCGACCA GGCCGAGGAC
GGCTACCGCT CGGTGCTGCC GGTGTGGGAC TGGGCGCGGC TGCCGGGCGT CACCACCGAG
CAGGGCCGGT CGCTGCGGCC CCGGCCCGAC CAGCCGCGCG GCGGCGGCGA GGCGATCGGG
TGGTCGGACG GGGAGAACGG CGTCGCCGCG CTGCGGCTGG CGGGCGTGGA GGGGTTCACC
GAGGGCTGGA AGACGTGGTT CTGCTTCGCC GACGCGGTCG TGGCGCTGGG CGCGGGCATC
ACCGCGCCGG ACGCGGTCGG GCCGGTGGTC ACCACGATCG ACCAGCGGCT CGCGGACCAC
GGCAGCGTCA CGTACGTGCC GATGACGACC GGGCACTTCT CCGGCGTGGA GCGGCGGACC
GGCAGCTGGC GGGACCTGTC CGGGGTGGAG AGCGGGCGTC CGGTGGAGGC CGACGTGTTC
GTGATGGGCT TCGACCACGG TCCCCGGCCG GAGAACGCCT CGTACGCCTG CCTCATCGCG
CCCGGCGACG AGCTGCCCGA GGTGGAGGTG CTGGCGAACC GGGTGGACCG GCAGGCGGTG
CGGTGCGGCT CGGTGGTGCT GGAGCGCTCC ATGGCCGGTT GA
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| Protein sequence | MSDLDVVRAR LRPPHQPGPG LPPLPDGTWA DIDYADHDAA DFPPLEHLRR ALSLPDGQRL
KALEAWRRLA PRSDNWWYNE IGAPRLVGDA LLGADLDRAQ RATWGTWLAE QAGPVPMTGQ
NLVWAQGIEL RRGLVEDDPE LVRRAVARMS EVLRTGDGEG IQEDLSFHQH GPQLYSGGYG
ASLVADLALW VRAVHGTPWA FGAAEVRLLA DFLVDGQQWA VHGGGFDFTT MGREIARADA
HHRTADLRAA VLRLLECDPP RTAELTAFDD RLAGHGAPLV GTRWYPRSDY LVHRRPGWSL
SVRMSSGRTV PTECLNGENL LGRHLGDGVA ALRLGDQAED GYRSVLPVWD WARLPGVTTE
QGRSLRPRPD QPRGGGEAIG WSDGENGVAA LRLAGVEGFT EGWKTWFCFA DAVVALGAGI
TAPDAVGPVV TTIDQRLADH GSVTYVPMTT GHFSGVERRT GSWRDLSGVE SGRPVEADVF
VMGFDHGPRP ENASYACLIA PGDELPEVEV LANRVDRQAV RCGSVVLERS MAG
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