Gene Amir_0397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0397 
Symbol 
ID8324556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp436286 
End bp437110 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content76% 
IMG OID644940941 
Productamidohydrolase 2 
Protein accessionYP_003098210 
Protein GI256374550 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCGTCG ACGCGCACCA CCACGTGTGG GACCTGGCGG TCCGCGACCA GCCGTGGATC 
ACCGGGCGGA TGTCCCGCAT CCGCAGGGAC TTCACCGTCC ACGACCTCGC CGGGGCCGCC
CCCGAGGTGA CCACGACCGT CCTGGTCCAG ACCGTCGCCG GGCCCGCCGA GACCCCGGAG
CTGCTCGCGC TCGCCGACCG CGAGCCCCTG GTGGGGGCGG TGGTCGGCTG GCTGGACCTG
ACCGGCGACG TCCCCGCCCA GCTCGCGGCC CTGCGGTCGC TGCCCGGCGC GCGCTGGCTG
CGCGGCGTCC GGCACCAGGT GCAGGTCGAG CACGACCCGG ACTGGCTGAT CCGGCCCGAC
GTCCTGCGCG GGCTGGCGGC GGTCGCGGCG GACGGGCTGG TGTACGAGCT GCTGACCCTG
CCGCACCAGC TCCCGGCGGC CCGCAGGGCG GCGGCGGCCC TGCCGCAGCT GACCTTCGTG
CTCGACCACT GCTCCAAGCC CCCGGTGGGC GGAGACCTGC GCGAGTGGGC GGCGGAGGTG
CGCGCGCTGG CGGCCCGCCC GAACGTGCTG TGCAAGCTGT CCGGGCTCGT CACCGAGGCC
GACTGGGCGA ACTGGTCGGT GACGGACCTG AGGCCGGTCT GCGCGACCGT CCTGGAGGCG
TTCGGGCCGC GCCGCCTGAT GTTCGGCTCG GACTGGCCGG TCTGCCTGCT GGCCGCGAGC
CACGCGGAGG TCCTGGCGGC GGCCCGCGAG CTGACCGCCG ACCTGTCCGC GGCCGAGCGC
GCCGCCCTGT TCTCGACCAC CGCGACCCTC GCCTACCGCC TGTGA
 
Protein sequence
MIVDAHHHVW DLAVRDQPWI TGRMSRIRRD FTVHDLAGAA PEVTTTVLVQ TVAGPAETPE 
LLALADREPL VGAVVGWLDL TGDVPAQLAA LRSLPGARWL RGVRHQVQVE HDPDWLIRPD
VLRGLAAVAA DGLVYELLTL PHQLPAARRA AAALPQLTFV LDHCSKPPVG GDLREWAAEV
RALAARPNVL CKLSGLVTEA DWANWSVTDL RPVCATVLEA FGPRRLMFGS DWPVCLLAAS
HAEVLAAARE LTADLSAAER AALFSTTATL AYRL