| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0350 |
|---|
| Symbol | |
|---|
| ID | 8324508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Actinosynnema mirum DSM 43827 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013093 |
|---|
| Strand | + |
|---|
| Start bp | 379930 |
|---|
| End bp | 380823 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644940895 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003098165 |
|---|
| Protein GI | 256374505 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3833] ABC-type maltose transport systems, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCATCG AGGCCGCTTC GCTGCGGGCC GCGACGCCCG CGCGCGAGTC CCGGAGGGCC
AAGCGCTCCC GCGCCGCGTC GATCGGGCTG CACGCCGCCC TGGTCACCGC GTCGCTGATC
GCGGTGTTCC CGGTGTTCTG GGTCGTGGTC ACCTCGTTCA AGCCGGACGC GCTGGCCGTC
GAGACCACGC CCAAGCTGGT CAACGAGTCC AGCCTGGACA ACTACACCCG CATCCTGTCC
GGGGAGAAGG GCGACTTCCT GGCCTGGTTC GGCAACTCGG TGCAGATCGC GCTGCTGACC
ACGGTGCTGG CGGTGTTCCT GTCGGCCACC GCCGGGTACG CGGCCAGCCG CTTCCGGTTC
CCCGGCAAGC GCAAGCTGCT GCTGTCGTTC CTGGTCGTGC AGATGTTCCC GTTCGCGGTG
CTGATCGTGC CGCTGTACAA CACCCTGCTG GCGCTGGGCG TGCAGGGCAC CGCGCTCGGC
CTGGTGCTGG TCTACTGCAC CACCGCCGTG CCGTTCTGCA CCTACATGCT CAAGGGCTAC
TTCGACACCA TCCCCGCCGA CATCGACGAG GCGGGCCGGG TGGACGGGCT CTCGCCGTTC
GGCGTGTTCT GGCGGCTGGT GCTGCCGCTG GCCAGGCCGG GGCTCGCGGT GACCTCGTTC
TACGCCTTCC TGACCGCGTG GGGCGAGGTG GCGTTCGCCT CGGCGTTCCT GTCGGCGGCC
GACGAGTCCA AGACCCTCGC GGTGGGCCTG CAGGTGTTCG TGCAGCAGAA CCGCACCGAG
TGGGGGCACC TGGCGGCGGC GTCCACCCTG GTCGCCATCC CGGCGGTCGC GGTGTTCTAC
CTCGTGCAGC GGTTCCTGGT CTCGGGGCTG GCGGGCGGCG CGGTGAAGGG GTGA
|
|---|
| Protein sequence | MSIEAASLRA ATPARESRRA KRSRAASIGL HAALVTASLI AVFPVFWVVV TSFKPDALAV
ETTPKLVNES SLDNYTRILS GEKGDFLAWF GNSVQIALLT TVLAVFLSAT AGYAASRFRF
PGKRKLLLSF LVVQMFPFAV LIVPLYNTLL ALGVQGTALG LVLVYCTTAV PFCTYMLKGY
FDTIPADIDE AGRVDGLSPF GVFWRLVLPL ARPGLAVTSF YAFLTAWGEV AFASAFLSAA
DESKTLAVGL QVFVQQNRTE WGHLAAASTL VAIPAVAVFY LVQRFLVSGL AGGAVKG
|
|---|
| |