Gene Amir_0218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0218 
Symbol 
ID8324374 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp243435 
End bp244502 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content72% 
IMG OID644940763 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_003098035 
Protein GI256374375 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGGCG GTCCGGTACT GGCACTGGTC GGCGCCACCG GCGCGGTCGG CACGGTGATG 
ATCTCGATCA TCAACAACCG GGAGACCGTG CCGTGGGGTG AGATCCGGCT GATCGCCTCC 
GCGCGCTCGG CGGGCAAGAA GATCCACGTG CGCGGCGAGG ACCTCACCGT CGTCGAGCTG 
ACCCCCGAGG CGTTCGACGG CGTCGACGTC GCCATGTTCG ACGTGCCCGA CGAGGTGTCC 
GCGCGGTGGG CGCCGATCGC CGCCGCGCGC GGCGCGGTCG CCGTCGACAA CTCCGGCGCG 
TTCCGCATGG ACGACGAGGT GCCCCTGGTG GTGCCCGAGG TCAACGCGGA CCGGATCGGC 
GACCGTCCCA AGGGGATCAT CGCCAACCCC AACTGCACGA CGCTGTCGAT GATGGCCGCG 
ATCGGCGCGC TGCACCGCGA GTTCGGGCTG CGCGAGCTGG TCGTCGCCTC CTACCAGGCC 
GCGTCCGGCG GCGGGCAGGC CGCGATCGAC CGGCTCCGCG CCGAGGTCGA GGCCGTCTCC 
GGCAAGCAGG TCGGCGAGCG CGCGGGCGAC GTGCGCGAGG CGCTCGACGC GGCGGGCCTG 
CCGGTGTCCG ACTCGCCGTT CCCCGCGCCG CTGGCGCTGA ACGTGGTGCC GTGGGCCGGG 
TCCCTCAAGG ACGACGGGTG GACCAGCGAG GAGCTGAAGG TCCGCAACGA GTCCCGCAAG 
ATCCTCGGCA TCCCGGACCT GAAGGTCTCG GCGACCTGCG TGCGGGTGCC CGTGGTGACC 
ACGCACTCGC TGGCCGTCCA CGCCGTGTTC GAGCGGCCGG TGACCGTCGG GCAGGCGCAC 
AAGATCTTCG AGGAGCAGCC GTCGGTCGTC CTGGTGGACG AGCCGGAGGC CCAGCGCTTC 
CCGACGCCCG CCGACGTCGT GGGCGGCGAC CCGACCTACG TCGGCCGGGT CCGCCAGGCG 
CTGGACTTCC CGAACGCGCT CGACTTCTTC GTGTGCGGGG ACAACCTGCG CAAGGGCGCC 
GCCCTCAACA CCTACGAGAT CGCCGAGGAA CTGGCGGGCA GGCTGTAG
 
Protein sequence
MSGGPVLALV GATGAVGTVM ISIINNRETV PWGEIRLIAS ARSAGKKIHV RGEDLTVVEL 
TPEAFDGVDV AMFDVPDEVS ARWAPIAAAR GAVAVDNSGA FRMDDEVPLV VPEVNADRIG 
DRPKGIIANP NCTTLSMMAA IGALHREFGL RELVVASYQA ASGGGQAAID RLRAEVEAVS 
GKQVGERAGD VREALDAAGL PVSDSPFPAP LALNVVPWAG SLKDDGWTSE ELKVRNESRK 
ILGIPDLKVS ATCVRVPVVT THSLAVHAVF ERPVTVGQAH KIFEEQPSVV LVDEPEAQRF 
PTPADVVGGD PTYVGRVRQA LDFPNALDFF VCGDNLRKGA ALNTYEIAEE LAGRL