Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0183 |
Symbol | |
ID | 8324333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 195181 |
End bp | 196023 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644940723 |
Product | transposase IS4 family protein |
Protein accession | YP_003098000 |
Protein GI | 256374340 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAGC CCCTGGTAGC AGAGCTATCG ACCAAGAAAG TTCTGCACCG CCAGGGGCTT CACGTGCTGT TCTACCGTGC CGCGCTGCCG TTGTCACATC AGACCCTGAC CTTCGTGTCC GGGCTGGTCC GCGCCCACCG CAAGCAGCTC GGATCGGTGT GGCGCAAGCT CAACCCAGGA CAACAAGCCC TGCTGGTGCT GGTGTACCTG CGCAAAGGCG AGACCTTCGC CGATCTCGCC GCCGGGTTCG CGGTCTCGAC CTCCACCTGC TGGCGCTATG TCAACGAGAC CGTCGAACTG CTCGCCCAGC GGTCCCCGAA GCTCCGAGAA GCGCTGCGCA AGGCGAAACG CCAGGGCATG GCCCACGTGG TGATCGACGG CACGCTCATC CCGATCGACC GGATCGCCGC CGACCGCCCC TTCTACTCCG GCAAGCACAA GATCCATGGA GTGAACCTGC AGGTGATCGC GTCCCCGGAC GGCACGATCC TGTGGGTGTC CGGCGACTTG CCCGGCAGCA CCCACGACAC CGCCGCCGCC CGGATCTGGA ACATCCTCGC CGCCCTGCGC CACGCCGGGC TGATCGCCCT GGGCGACAAG GGCTACCACG CCTACGACCC GACCGACCGC CACGTGATCA CCCCTTACAA GGGCCGCAAC AAACCTGAAT CACAGAAGGA CGCCAACCGC GCCCATGCCC GCCTGCGCGG CCCCGGCGAA CGCGCCAACG CCCAGCTCAA GACCTGGCGC ATCCTCCGCA AACTCCGCTG CTGCCCCCGC CGCGCCGGCC GACTGGCCAA AGCCATCCAC GTCCTACAGA ACTACGAGGC CACCACAGGA TGA
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Protein sequence | MAKPLVAELS TKKVLHRQGL HVLFYRAALP LSHQTLTFVS GLVRAHRKQL GSVWRKLNPG QQALLVLVYL RKGETFADLA AGFAVSTSTC WRYVNETVEL LAQRSPKLRE ALRKAKRQGM AHVVIDGTLI PIDRIAADRP FYSGKHKIHG VNLQVIASPD GTILWVSGDL PGSTHDTAAA RIWNILAALR HAGLIALGDK GYHAYDPTDR HVITPYKGRN KPESQKDANR AHARLRGPGE RANAQLKTWR ILRKLRCCPR RAGRLAKAIH VLQNYEATTG
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