Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0163 |
Symbol | |
ID | 8324312 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 178054 |
End bp | 178677 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644940702 |
Product | protein of unknown function DUF1089 |
Protein accession | YP_003097980 |
Protein GI | 256374320 |
COG category | [S] Function unknown |
COG ID | [COG3554] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.786623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCACCG CCAGGACGGC CGAGCGCGCC ACCGCCCAGC AGGGCGAGTC CCGCGCCGCC GCTCGCATGG TCACCTGGCA GGGGTGCTCG GTGCCCAGGC TGGAGCAGGT CCGCGTGCTG GTGTCCGAGC ACAAGCTCAG GGCGTCCGGC CGGATCGTCG CCTCGGGGCC CGCCGAGCAG TTCAACGGCT CCTTCGAGCT GTCGGTCGGC GAGGACGGCG CCGTGACGCG GCTGCTGCTG CGCACCGCCA CCGTCGCCGA GGAGCGGCAC GTCTCGCTCA GCCGGTCCTC CGACGGCGTC TGGATGGTCG ACCGGGGCCA CGGCGGTGAG CGGGCCGACT TCGACGGCGC GGTCGACGTG GACGTGGAGT TCGCGGTGCT GTTCGCGGCC ATCCCGGTCC GGCGGCTGGG CCTGCACCGG GAGCCCGGTG AGGCCGAGCT GCCCGTGGTG CGGGTCAGCC TGCCCGACCT GGACGTCACC GTCGTGCGGC GCGGCTACCG CACCGCGTCG GTCGGCGACG GCGGCTCGGT CGTGGCGATC CGCGCGGAGG ACGGCGAGCA GGACGTCACC GTGGACGCCG AGGGGCTGGT CGTGGACTAC CCGGACGTGG CGCAAAGGAT CTGA
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Protein sequence | MSTARTAERA TAQQGESRAA ARMVTWQGCS VPRLEQVRVL VSEHKLRASG RIVASGPAEQ FNGSFELSVG EDGAVTRLLL RTATVAEERH VSLSRSSDGV WMVDRGHGGE RADFDGAVDV DVEFAVLFAA IPVRRLGLHR EPGEAELPVV RVSLPDLDVT VVRRGYRTAS VGDGGSVVAI RAEDGEQDVT VDAEGLVVDY PDVAQRI
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