Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0118 |
Symbol | |
ID | 8324264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 125363 |
End bp | 126613 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 644940654 |
Product | seryl-tRNA synthetase |
Protein accession | YP_003097935 |
Protein GI | 256374275 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCGACC TCAAGGCACT GCGCGAGAAC CCGGAAGCCG TTCGTGCGTC CCAGCGGGCG CGGGGCGAGG ACGAGTCCCT GGTCGACGCC CTGCTGTCCG CCGACGAGCG CCGCCGGTCC GCCGTCTCCC GCGCCGACAC GCTGCGCGGT GAGCAGAAGG CGTTCGGCAA GCAGGTCGGC AAGGCCCGCG GTGAGGAGCG CGAGGCGCTG CTCGTCAAGG GCAAGGAGCT GGCCGCCGAG GTGAAGGCCG CCGAGGCCGA CCAGGCCGCC GCCGAGGCCG AGCTGACCGA GCTGCACCGC TCCGTCCCCA ACCTCGTGCA CCCCGACGCC CCCGAGGGCG GCGAGGACGA TTACGTCGTG GTCAAGCACG TCGGGGAGCC CCGCGAGTTC GACTTCGAGC CCCTCGACCA CCTCGACCTC GGCACCCGGC TCGGCGCGAT CGACATGGAG CGCGGCGCCA AGGTGTCCGG CTCGCGGTTC TACTTCCTCA CCGGCATCGG CGCCCAGCTC GAGCTCGCCC TGCTGAACAT GGCCGTCGCC CAGGCGACCG CCGCGGGCTT CCAGCTCATG ATCACCCCGA CCCTGGTCCG GCCCGAGGTC ATGGCGGGCA CCGGGTTCCT CGGCGCGCAC TCCAGCGAGA TCTACCGCCT GGAGGCCGAC GACCTCTACC TCGTCGGCAC CTCCGAGGTC CCCCTCGCCG GCTACCACGC CGACGAGATC ATCGACGGCC CGCGCCGCTA CGCGGGCTGG TCGTCCTGCT ACCGCCGCGA GGCGGGCTCC TACGGCAAGG ACACCAGGGG CATCATCCGG GTGCACCAGT TCAACAAGGT CGAGATGTTC TCCTACGTCC CGCCGGAGGA GGCCGAGGCC GAGCACGCCC GCCTGCTCGC CTGGGAGGAG GAGATGCTCG CCAAGGTCGA GGTCCCCTAC CGGGTGATCG ACACCGCCGC GGGCGACCTC GGCACCAGCG CCTCCCGCAA GTTCGACTGC GAGGCGTGGG TGCCCAGCCA GCAGGCCTAC CGCGAGCTCA CCTCCACCTC GAACTGCACC ACCTTCCAGG CCCGCAGGCT GAACGTGCGC TACCGCGACG AGAACGGCAA GTCGCAGATC ACCGCCACGC TCAACGGCAC CCTGGCCACC ACCCGCTGGA TCGTCGCCAT CCTGGAGAAC CACCAGCAGG CCGACGGCTC CGTCGTCGTC CCGCAGGCGC TGCGCCCGTT CCTGGGCAAG GACGTCCTCC TCCCGGCCTG A
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Protein sequence | MIDLKALREN PEAVRASQRA RGEDESLVDA LLSADERRRS AVSRADTLRG EQKAFGKQVG KARGEEREAL LVKGKELAAE VKAAEADQAA AEAELTELHR SVPNLVHPDA PEGGEDDYVV VKHVGEPREF DFEPLDHLDL GTRLGAIDME RGAKVSGSRF YFLTGIGAQL ELALLNMAVA QATAAGFQLM ITPTLVRPEV MAGTGFLGAH SSEIYRLEAD DLYLVGTSEV PLAGYHADEI IDGPRRYAGW SSCYRREAGS YGKDTRGIIR VHQFNKVEMF SYVPPEEAEA EHARLLAWEE EMLAKVEVPY RVIDTAAGDL GTSASRKFDC EAWVPSQQAY RELTSTSNCT TFQARRLNVR YRDENGKSQI TATLNGTLAT TRWIVAILEN HQQADGSVVV PQALRPFLGK DVLLPA
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