Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0042 |
Symbol | |
ID | 8324187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 45733 |
End bp | 46482 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644940580 |
Product | nuclear export factor GLE1 |
Protein accession | YP_003097862 |
Protein GI | 256374202 |
COG category | [S] Function unknown |
COG ID | [COG4549] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCCACCA CTCGCACCGG CCTGCGCCCG CTCGTCCGCG CAGGCGCACT CCTCACCACC GCGGGCTTCC TCGCGCTCGG CACGGCGGGC ACCGCCTCCG CGCACGTCTC CGCGTCGACC ACCGCCCCGG CCACCCAGGG CGGCTACGCG AAGGTCATCT TCCGCGTGCC GAACGAGCGC CCCGACTCCG GCACGGTCAA GCTGGAGGTC ACCCTCCCCG CCGAGTACCC GCTGGCCTCG GTCAGCACGA AGCCGCTGCC CGGCTGGCAG GTCGAGGCGG TCAAGGCCAC GCTCGACAAG CCGGTCACCA GCCACGGCCG CGAGGTCACC GAGGCCGTCC GCACCGTGGT GTGGACCGCC GACGCGGGCG TGCAGATCGC GCCCGGTCAG TTCAACGAGT TCGAGGTGTC GGTCGGCCCG CTGCCCGACA CCACCGAGCA GCTGGTCATG CCCGCGAAGC AGACCTACGC CAGCGGCGAG GTCGTCGACT GGAGCGCCCC GCCCGCCGAC GAGGAGCCCG AGCACCCCGC GCCGGTGCTG AAGCTGGTCA AGCCCGCCGA GGGCGCCGAC TCGCACGGCA ACGCCCCCGC CGGGTCCGGG GACTCGCACT CCGAGACCGC CGCGTCCACG ACCACCGACG ACACCGCCCG CTGGCTGGGC GGCGCGGGCC TCGCGGTCGG TGCGCTCGGC CTCGGCCTCG GCGCGGGCGC CGTCCTGCGC ACCCGCCGCT CGGGCAAGCC CTCGGCATGA
|
Protein sequence | MSTTRTGLRP LVRAGALLTT AGFLALGTAG TASAHVSAST TAPATQGGYA KVIFRVPNER PDSGTVKLEV TLPAEYPLAS VSTKPLPGWQ VEAVKATLDK PVTSHGREVT EAVRTVVWTA DAGVQIAPGQ FNEFEVSVGP LPDTTEQLVM PAKQTYASGE VVDWSAPPAD EEPEHPAPVL KLVKPAEGAD SHGNAPAGSG DSHSETAAST TTDDTARWLG GAGLAVGALG LGLGAGAVLR TRRSGKPSA
|
| |