Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3965 |
Symbol | |
ID | 4671712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 4221565 |
End bp | 4222608 |
Gene Length | 1044 bp |
Protein Length | 347 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639841007 |
Product | pirin domain-containing protein |
Protein accession | YP_988147 |
Protein GI | 121596251 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.19482 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.318513 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCC GCGCCAGTCC CGTCCTGCAA TCCCAGCCCC TGGGGCCGCT GTGGCCCACG CTCGATCCGT TCCTGTTCTG CGCCCACCAT GACGACGCCT ATCCCGCCGG CAACGGCGCC ATGGGCGTGC AGGCGGTGGC GCTGGAGGGG CGCCAGATGG GCAGCGACTT CAGCCGCAAG GACGGCTTTT CGATGTACCA CGGCGAGCAC GTGCCCGGCT TCCCCGGCCA CCCGCACCGG GGCTTCGAGA CCGTCACGCT GGTGCGCAAG GGCCTGATCG ACCATGCCGA CTCGCTGGGC GCGGCCGCGC GCTTCGGCGG CGGCGACGTG CAGTGGGTCA CCGCCGGCGC GGGCATCATG CATTCGGAGA TGTTCCCGCT GCTGAACACC GACGCGCCCA ACCCGCTGGA GCTGTTCCAA ATCTGGCTGA ACCTGCCCGC GCGCCACAAG ATGGTGCGGC CGCACTTCAC CATGCTGTGG AACGAACGCA TCCCGCGCCT GGAGCATGCC GACGCGGCCG GCCTGCGCAC CACGGTTACC GTGGTCGCCG GCGCGCTGGA CGGCGCCGGT GCGCCGCTGC CGCCGCCCCC CGAGTCCTGG GCCGCGCAGG CGGACGCCGA CGTCGCCATC TGGACGCTGC GCATGGAGCC CGGCGCGCAT TGGACGCTGC CGGCGGCCCG CGGACAGGGC ACGCGCCGCA TGCTGTACTG GTTCGTGGGC GAAGGGCTCT CGATCGCCGG CGAGCCCCAG GGCGGCCACG CGGCGCTGGA GGTGGCGGCC GATCGGGCGC TGGAGCTGGT CAACACCGGC GGCGACACCG TGGAATGCCT GCTGCTGCAG GGCCGTCCCA TCGGCGAGCC GGTGGTGCAG TACGGCCCGT TCGTGATGAA CACCCAGCAG GAAATCATGC AGGCCATGCA GGACTTTCGC CGCACGCAGT TCGGCGGCTG GCCCTGGGAT GCGAGCGACC CGGTGCACGG CAGCGCCCCC CGGCGCTTTG CGCGCCACCC GGGCAGCGCG CAGGACGAGG TGCCGCAGGC CTGA
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Protein sequence | MNTRASPVLQ SQPLGPLWPT LDPFLFCAHH DDAYPAGNGA MGVQAVALEG RQMGSDFSRK DGFSMYHGEH VPGFPGHPHR GFETVTLVRK GLIDHADSLG AAARFGGGDV QWVTAGAGIM HSEMFPLLNT DAPNPLELFQ IWLNLPARHK MVRPHFTMLW NERIPRLEHA DAAGLRTTVT VVAGALDGAG APLPPPPESW AAQADADVAI WTLRMEPGAH WTLPAARGQG TRRMLYWFVG EGLSIAGEPQ GGHAALEVAA DRALELVNTG GDTVECLLLQ GRPIGEPVVQ YGPFVMNTQQ EIMQAMQDFR RTQFGGWPWD ASDPVHGSAP RRFARHPGSA QDEVPQA
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