Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_3958 |
Symbol | |
ID | 4671914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 4214616 |
End bp | 4215431 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639841000 |
Product | nucleotidyl transferase |
Protein accession | YP_988140 |
Protein GI | 121596244 |
COG category | [J] Translation, ribosomal structure and biogenesis [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCACGG TGCCTTCCTG CTTCGCAGAT TCCTCCATCA CGACGGCCCC CGGCCCGGCG CACGGCTGGG CGCAAGTGCC GGCCCTGCTG CTCGCCGCCG GCCGCGGCGA GCGCATGCGC CCGCTGACCG ACGCCTGCCC CAAGCCATTG CTCGAAGTGC GCGGTCGGCC GCTGCTGGAG TGGCACCTGC GTGCGTTGGT CGAAGCGGGT GTCGAGCGCG CCGTGATCAA CACCGCGTGG CTGGGCGAGC AGATTGGCCA CCGGTTTTCA GATGTTTTTG CCGTCGAAGG CAAGCGGGAC AAGCGCGAGC AGCTATCAAT TTCATACTCC CATGAAGGCC GGGATTTCGG TCGCGCGCTG GAGACGGCCG GCGGTATCGC ACGCGCGCTG CCGCAGCTGG GGCCGGTGTT CTGGCTGGCG GCGGGCGATG TGTTCGCGCC CGACTTCACC TTCGAGGCGC AGGCCGTGCA GCGGTTCGTG GCCGGCGATG CCCTGGCCCA TCTGTGGCTC GTGCCCAACC CGCCGCACCA CCCGCGCGGC GACTTCGGCC TGTCGCCCGA GGGGTTGGCG CTGAATCTGC CGGCGCAGGA CCCGCGGCCG CGCTACACCT ACAGCACCAT CGCCCTGCTG CGCGCCGAGC TGTTCACCGC GCCCTGGTGC GACATCGCAC CCGGCAACCC CGAGGGTGTG GCCGCGCCCC TGGCGCCGCT GCTGCGCCGC GCCATGGATG CGGGGCGGGT GACGGCGACG CTCCATACCG GGCGCTGGAC CGATGTGGGT ACGCCCGAGC GGCTCGCTGA GCTGAACGCC GGCTGA
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Protein sequence | MPTVPSCFAD SSITTAPGPA HGWAQVPALL LAAGRGERMR PLTDACPKPL LEVRGRPLLE WHLRALVEAG VERAVINTAW LGEQIGHRFS DVFAVEGKRD KREQLSISYS HEGRDFGRAL ETAGGIARAL PQLGPVFWLA AGDVFAPDFT FEAQAVQRFV AGDALAHLWL VPNPPHHPRG DFGLSPEGLA LNLPAQDPRP RYTYSTIALL RAELFTAPWC DIAPGNPEGV AAPLAPLLRR AMDAGRVTAT LHTGRWTDVG TPERLAELNA G
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