Gene Ajs_3386 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_3386 
Symbol 
ID4673914 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp3573304 
End bp3574515 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content68% 
IMG OID639840424 
Productfatty acid desaturase 
Protein accessionYP_987582 
Protein GI121595686 
COG category[I] Lipid transport and metabolism 
COG ID[COG1398] Fatty-acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.406148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGTTTG ATGGCGCCGC GTGGAATACC GCGCTCGACT GGCTGGCGCA TGGCGTGTGG 
GACCTGGCCT GGTGGCAGAT CGTGCTCTAC ACCCTGGCCA CCACTCACAT CACGATCGCG
GCGGTGACGA TCTTCCTGCA CCGCTCGCAG GCGCACCGTG CGCTGGACCT GGGGCCTGTG
CCTGCGCATT TCTTCCGCTT CTGGTTGTGG CTGGGCACGG GCATGGTCAC CAAGGAATGG
GTGGCCATCC ACCGCAAGCA CCACGCCAAG TGCGAGACGC CCGACGACCC CCACAGCCCG
CAGACGCGCG GCCTGCGCAC CGTGATGTGG CGCGGGGCCG AGCTGTACCG TGCCGAGGCG
GCCAACGCCG AGACGCTGAA GAAGTTCGGC CATGGCACGC CGGACGACTG GATGGAGCGC
AACGTCTACA GCCGCTTCAC CTGGCAGGGC GTGGGGCTGA TGCTGGTCAT CAACCTGGTG
CTGTTCGGCG CCGTGGGCGC CGCCGTGTGG GCCGTGCAGA TGGCGTGGAT CCCGTTCTGG
GCCGCGGGCG TGGTCAACGG CGTGGGCCAC TATTGGGGTT ACCGCAACTT CGAGGCGCAG
GACGCCTCCA CCAACCTCGT GCCCTGGGGC CTTGTGATTG GCGGTGAAGA ACTGCACAAC
AACCACCACA CCTATCCGAC GGCCGCGAAG TTCTCGGTCA AGCCGTACGA GTTCGACGTG
GGGTGGCTCT ACATCAGCGC GTTGCAGCGC CTGGGCTGGG CCAAGGTCAA GAAGGTGCCG
CCCAAGCTGC GCCTGGGCGC CGTGAAGCCG GTGGCCGACG AAAAGACGCT GGAGGCGCTC
ATCGCCAACC GCTACGAGGT CATGGCTGGC TATGCACGCG GCGTGCGCCA GGCCTGCAAG
GACGAGATCG CCGCGCTCAA GGCGCGCAAG GCCGACGTGT CGGCCCTCAA GCGCGCCAAG
CGCTGGCTGC ACCGCGACGC CGAGAAGGTC CCTGCGCAGG CACAGCCGAC GCTGGCCGAA
GTGCGTGCGG CGCACCCCGT ACTCGACAAG ATGGTCACCA TGCGCGAGGA GCTGCGCCAG
CTCTGGCTCA ACACCTCGCA GTCGCGCGAT CAGCTGACCG CAGACCTGCA AGCCTGGTGC
CAGCGGGCCG AGGCCAGCGG CATCGCGGCG CTCAAGGAGT TTTCGCTGAA GCTGCGGGCA
GCCCACGCCT GA
 
Protein sequence
MLFDGAAWNT ALDWLAHGVW DLAWWQIVLY TLATTHITIA AVTIFLHRSQ AHRALDLGPV 
PAHFFRFWLW LGTGMVTKEW VAIHRKHHAK CETPDDPHSP QTRGLRTVMW RGAELYRAEA
ANAETLKKFG HGTPDDWMER NVYSRFTWQG VGLMLVINLV LFGAVGAAVW AVQMAWIPFW
AAGVVNGVGH YWGYRNFEAQ DASTNLVPWG LVIGGEELHN NHHTYPTAAK FSVKPYEFDV
GWLYISALQR LGWAKVKKVP PKLRLGAVKP VADEKTLEAL IANRYEVMAG YARGVRQACK
DEIAALKARK ADVSALKRAK RWLHRDAEKV PAQAQPTLAE VRAAHPVLDK MVTMREELRQ
LWLNTSQSRD QLTADLQAWC QRAEASGIAA LKEFSLKLRA AHA