| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_3252 |
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| Symbol | |
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| ID | 4672473 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 3436966 |
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| End bp | 3437634 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639840292 |
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| Product | small-conductance mechanosensitive channel-like protein |
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| Protein accession | YP_987451 |
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| Protein GI | 121595555 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.309546 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGCCGC GACTGAAAAC CGCCCTCCCC GTCTGGATGC ACGACTGGCT CGACATCATC
GTGCCCGGTG TGCAGATTGT CCTCATCGTC CTGGCCGCGC TGCTGCTGCA GCGCCTGCTG
CTGCGCATCA TCATGCGGGC CAGCGACCAC TACCAGTTCC CGCACGAACT GCTCACACCC
ATCAACGCCG TGGTGCGCTG GCTCATCCTG GGCAGCGCCG GCCTGCTGGT GCTGGAGCGC
CTGGGGGTGT CAGCGGCCGT GCTGTGGACG GCCTTCACCG GCTTCGCCAC AGTGGGCGCG
GTGGCGTTCT TCGCGGCATG GAGCGTGCTG TCCAATCTGT TTTGCGCCTT TCTGATCTTC
ACCGTCGGCC CGTTCCGCGT GGGAGACCAC ATCGAACTGC TGGACACCGC CGACAAGCCC
GGCGCCCTGG GCCGCGTGAT GGACATCAAC TTGCTTTACA TCACGCTGGA GGACGCCACC
GCCCCCGAGC CTGGCACGCT GCTGCAGATT CCCAACACAC TGATCTTCCA GCGCGTGGTG
CGCCGCTGGC GTGCCGGCAC GCCGGTGCCA GAGTCACGGC TACATCCTGC TCCGGATTCC
GCCGCCTGCG CCGCCACCGC TCGCGAGCCC GCCAGCACGC CCGCGCCCAA GCCGGCGAGC
TTTCCTTGA
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| Protein sequence | MLPRLKTALP VWMHDWLDII VPGVQIVLIV LAALLLQRLL LRIIMRASDH YQFPHELLTP
INAVVRWLIL GSAGLLVLER LGVSAAVLWT AFTGFATVGA VAFFAAWSVL SNLFCAFLIF
TVGPFRVGDH IELLDTADKP GALGRVMDIN LLYITLEDAT APEPGTLLQI PNTLIFQRVV
RRWRAGTPVP ESRLHPAPDS AACAATAREP ASTPAPKPAS FP
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