Gene Ajs_2539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2539 
Symbol 
ID4672018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2704430 
End bp2704801 
Gene Length372 bp 
Protein Length123 aa 
Translation table11 
GC content62% 
IMG OID639839604 
Productconjugal transfer relaxosome component TraJ 
Protein accessionYP_986773 
Protein GI121594877 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0128505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0000206935 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACGATG AGAAGCGAAT CACCAGGAAA GGCAGCCCAC CGATCAAGGT GTACTGCCTT 
CCAGAAGAAC GCGAACTGAT TGAGGCGAAC GCCAAGATGG CGGGAATCAG CGTGGCGCGC
TACCTGCGCG ACGTAGGGCA GGGCTACCAG ATCAAGGGAG TCATGGACTA CCACTACGTG
CGCGAGCTGG TGCGCGTGAA TGGCGACCTG GGCCGGCTGG GCGGCTTGCT CAAGCTCTGG
CTGACCGACG ACCCGCGCAC TGCCCGTTTC GGCGATGCAA CGATCCTCGC CTTGCTGGCG
AGGATCGAAG CCACCCAGGA TGAAATGAGC CGGCTTATGA AATCGGTGGT GCAGCCGAGG
GCCGAGCCTT GA
 
Protein sequence
MDDEKRITRK GSPPIKVYCL PEERELIEAN AKMAGISVAR YLRDVGQGYQ IKGVMDYHYV 
RELVRVNGDL GRLGGLLKLW LTDDPRTARF GDATILALLA RIEATQDEMS RLMKSVVQPR
AEP