| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2488 |
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| Symbol | |
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| ID | 4673145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 2650282 |
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| End bp | 2651469 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639839556 |
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| Product | major facilitator superfamily transporter |
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| Protein accession | YP_986725 |
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| Protein GI | 121594829 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.0416147 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATCTGG CGCTTGCGCG GCTGATCGCT GGCCAGATCT GCATCCACGC CAGCATGGCG
GGCATGCGCA TGGCCGCGCC GCTGCTGGCG CTGCGCGAGG GCTACAGCGC GGCGGCCGTG
GGCGTGCTGC TGGCGCTGTT CGCGCTCACG CAGGTGTTCC TGGCGCTGCC GGCGGGACGC
TATGCCGACC GCCATGGGCT CAAGCGCCCG GTGCGCCACG CGGTCGTCGC GGCCGTCCTG
GGTGCCGGCG CGGCGCTGGT ATGGCCGACG TTTGCGGTGC TGTGCGCTGC GGCACTGCTC
ACCGGTGGCG CCACGGGGGC TGCCACGATC GCCTTGCAAC GCCACGTGGG TCGCGCCGCG
CACGGCGGCA CGCAGCTGCG CCAGGTCTTC AGCTGGCTGG CCATCGGGCC GGCGGTGTCC
AACTTCGTGG GCCCGTTCTG CGCGGGGCTG CTGATCGATC ACGCGGGTGC GCAGGCGGGC
GCGACCATGG GCTTTCGCGC GGCCTTCGCG CTCATGGCCG TATTGCCTTT GGCCACCTGG
TTCTGGGTGC GCGGCACGCA GGAGATGCCG CCAGTGGTGG CCGCGGAGGA CGGCACGCGC
GCGCGGGCCT GGGACCTGCT GGCCGAGCCC GGCTTTCGGC GGCTGCTCAT CGTGAACTGG
CTGCTGTCGT CGTGCTGGGA CGTGCACACC TTCGTGGTGC CGCTGCTGGG GCATGAGCGG
GGGCTGTCGG CCTCGGTGAT CGGCTCCATC CTCGGCGCGT TCGCGATTGC CGCCGCGGTG
ATCCGCATGC TCATGCCGCT GGTGGCCGAC CGGCTGCGCG AATCCACCGT GGTCACCGGC
GCCATGGTGG CGACGGCACT GCTGTTCGCG GTCTATCCGC TGCTGCCGAC GGCCGTGACG
CTGGGAGCGT GCTCGGTGCT GCTGGGGTTC GCGCTGGGCT CGGTGCAGCC CATGATCATG
AGCATGCTGC ACCAACTCAC GCCCGCGCAC CGCCATGGCG AGGCGCTGGG TCTGCGGCTG
ATGGCGATCA ACGGCTCCAG CGTGGTGATG CCGCTGCTGT TTGGCACCGC GAGCACGCTG
GTGGGGCTGA GTGGCCTGTT CTGGGCCGTG GGCGCCACCG TGGGGCTGGG TGCGCGCGTG
GCCTGGCGGT TGCGCGGCGA GGCGCCGGCC CCTCCGCCGC ATCCCTGA
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| Protein sequence | MNLALARLIA GQICIHASMA GMRMAAPLLA LREGYSAAAV GVLLALFALT QVFLALPAGR
YADRHGLKRP VRHAVVAAVL GAGAALVWPT FAVLCAAALL TGGATGAATI ALQRHVGRAA
HGGTQLRQVF SWLAIGPAVS NFVGPFCAGL LIDHAGAQAG ATMGFRAAFA LMAVLPLATW
FWVRGTQEMP PVVAAEDGTR ARAWDLLAEP GFRRLLIVNW LLSSCWDVHT FVVPLLGHER
GLSASVIGSI LGAFAIAAAV IRMLMPLVAD RLRESTVVTG AMVATALLFA VYPLLPTAVT
LGACSVLLGF ALGSVQPMIM SMLHQLTPAH RHGEALGLRL MAINGSSVVM PLLFGTASTL
VGLSGLFWAV GATVGLGARV AWRLRGEAPA PPPHP
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