Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_2250 |
Symbol | |
ID | 4670779 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2385355 |
End bp | 2386710 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639839317 |
Product | D-serine dehydratase |
Protein accession | YP_986489 |
Protein GI | 121594593 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3048] D-serine dehydratase |
TIGRFAM ID | [TIGR02035] D-serine ammonia-lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.81638 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTCCG TTGTTTCCCC ACAGGACCAC TTGCAGGACG ACGCCCCGGC TGCACAACTG CGCCGCGCCG AGCCCTGCCT ATGGCTCAAC CCGCACAGGC AGCCCATACC CGCCGCACGG CAGGCCGTGG CCGGTGATCA CATTAGTCTG GATGATACGG AGAAGGCAGC GGCACGCTTC GCGCGCTTTG CGCCGCTGCT GGAGGGCGTG TTCCCCGAGT TGCAGGCGAC GGGTGGCGTG ATCGAGTCGC CCCTGTTACC CGCATCCAGC CTGCATGCCG CGGCGGGGCT CGTCGCGGGC CAGGGCGCGC TGTGGATCAA GGCGGACCAC CGGTTGCCCG TGGCTGGGTC CATCAAGGCA CGCGGAGGCA TCCATGAAGT GCTGGAGCTG GCCGAGCGCC TGGCACTGCA GCACGGCCTG CTGACGCCGC AGTCCGATGC CGACGACTAC CGCGCCCTGG CAAACCCCGC TGCGCGCGCC GTGTTTGCGC GCTACACCGT GGCCGTGGGC TCCACGGGCA ACCTGGGCCT GAGCATCGGC GTGGCGGCAT CGGCGCTGGG TTTTCACGCC GTGGTGCACA TGTCGGCCGA TGCCAAGGAA TGGAAGAAGC AGCGTCTGCG CCAGCGCGGC GTGCAGGTGG TGGAGCACGC GGGTGACTAC GAGGGCGCCG TGGCCGCGGG GCGCGCGCAG GCGGCGCAGG ACCCGTTCAG CCATTTCGTG GACGACGAAC GCTCGCTGTC GCTGCTGCTG GGTTACAGCG CCGCGGCGCT TCACCTGCGC CAGCAGTTGC GGGACGCAGG CATCGTCGTG GATGCGCAGC ACCCGCTGTT CGTTTACTTA CCCTGCGGGG TGGGGGGGGC GCCGGCGGGC ATCACCTTCG GCCTGCGGCA GGTGCTGGGG GCGCATGTGC ACTGCTTTTT CGCGGAGCCC GTGCAGTCGC CGTGTTTCAT GGTGCAAATG ATGGCCGGAC AGGGCGCACA CCCCTCGGTG TACGACTGGG GCCTCACCAA CCGGACGGAA GCCGACGGCC TGGCCGTGCC ACGCGCGTCC CTGCCCGCGG CCGAGCTGAT GGAGCCGTTG CTGGCGGGCT GCTTCACCGT GTGCGACGAC ACCCTGTTTC GCCAACTGGT ACAGGTGCTG GATGCCACGG GCGAGCGCAT CGAGCCGTCC GCGGCGGCGG GCCTGAGCGG CCCCGGTTTC CTGACGGGCA CCGAGACGGG CCGCACCTGG CTGCACGCGC AAGGTCTGTG GCCCCACCTG GCGCAGGCCA CGCACCTGGT GTGGACCACC GGCGGACTGT ACGTGCCGCC CGAGGCCTAC GCGCGCTTCG AGGAACGTGG CCGGGCCCTG GGTTGA
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Protein sequence | MPSVVSPQDH LQDDAPAAQL RRAEPCLWLN PHRQPIPAAR QAVAGDHISL DDTEKAAARF ARFAPLLEGV FPELQATGGV IESPLLPASS LHAAAGLVAG QGALWIKADH RLPVAGSIKA RGGIHEVLEL AERLALQHGL LTPQSDADDY RALANPAARA VFARYTVAVG STGNLGLSIG VAASALGFHA VVHMSADAKE WKKQRLRQRG VQVVEHAGDY EGAVAAGRAQ AAQDPFSHFV DDERSLSLLL GYSAAALHLR QQLRDAGIVV DAQHPLFVYL PCGVGGAPAG ITFGLRQVLG AHVHCFFAEP VQSPCFMVQM MAGQGAHPSV YDWGLTNRTE ADGLAVPRAS LPAAELMEPL LAGCFTVCDD TLFRQLVQVL DATGERIEPS AAAGLSGPGF LTGTETGRTW LHAQGLWPHL AQATHLVWTT GGLYVPPEAY ARFEERGRAL G
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