| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_2198 |
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| Symbol | |
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| ID | 4674412 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 2323302 |
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| End bp | 2326442 |
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| Gene Length | 3141 bp |
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| Protein Length | 1046 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639839267 |
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| Product | helicase domain-containing protein |
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| Protein accession | YP_986439 |
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| Protein GI | 121594543 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0553] Superfamily II DNA/RNA helicases, SNF2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.33194 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATCT CGAACGATCA GAAGCACCAC ACCTACCGTA CCCGTCCGGA GCCCGGCCAG
CTGGTCGAGG TTCGCCGGCG CCAGTGGGTC GTGGCGGATG TCGCCTCCTC GAAATTGGAA
TCGGCTTCGG CGTCGCAGAA CTGCGTGACG CTTTCTTCCA TCGACGAGGA CGGCCTCGGC
GAAGAACTGG AAGTCATCTG GGAGATCGAA CCCGGCGCAC AAGTCATCGA GCGTGCGGGC
CTGCCTTCCA TTACCGGGCA AGACCACTCC GACACGCTCG AAGCCTTCCT GGATGCGGTG
CGATGGGGCG CCGCCACCAA TGCAGACCGA GGGTTTCTGC AGGCACCGTT CCGCAGTGGC
GTCAGCATCG AGGACTTTCA GCTCGATCCT TTGGTGCGCG CCATCGACAT GGCGCGCGTC
AACCTGCTCA TCGCCGACGA CGTCGGCTTG GGCAAGACCA TCGAGGCGGG GCTGGTGATC
CAGGAGATGC TGCTCCGGCA CCGTGCCCGC ACCGTCTTGA TCATCTGTCC TGCATCCCTT
CAGGAGAAAT GGCGCATCGA GATGCTGGAG AAGTTCGGCC TCGACTTCCG CGTGGTCGAC
ACTGCCTACA TCAAGCAATT GCGGCGCGAA CGCGGCATCC ACGCCAATCC GTGGACATCT
CATCCGCGCC TCATCGCCTC GATGGACTGG GTCAAGAGTG GCGAGGGGCT GCGCGCCATG
CGCGATGTCC TGCCGCCCCA TGCCGGCCAT CCGCGCAAGT TCGATCTACT GGTCGTCGAC
GAAGCGCACA ACATCGCCCC CGCCGCCGGC GCGCATTACG CCCTCGAGAG TCAGCGGACC
CGCTTCATCC GCGCGATCAG CCCGCATTTC CAGCATCGCC TGTTCCTGAC CGCAACGCCG
CACAACGGCT ACACCGAGTC GTTCACCTCA CTGCTGGAGT TGCTGGACGA TCAACGCTTC
GCCCGGAACA TCCTCCCCGA CGAGAAGCAG CTGAGCCAGG TGATGATTCG TCGCCTGAAG
AGCGATCTCG TCGATGCTGA CGGCAAGCCC CTGTATGCCC AGCGAAAGCT CCAGGCGCTG
GCGGTCCCAT ACACGGACGA GGAACGGGAG ATCCACCAGA AGCTGAACGA TTACTGTGCC
AGCCGCGAAA AAGACGCGGA GAAGACCGGC AGCACATTCG GCACTTCGTT CGTCAATCAA
CTGCTCAAGA AGCGCCTCTT CTCGTCGCCC GCCGCGTTCG CTTCCACGCT CGAGAAGCAC
GTCGCCTCGC TGTCGAATGG CGCCAAGCCC AAGGGTCGAG ATGCCATGGC CGAGCGCATC
CTGCGCAAAG CCATCCTGAA AGCAGACGAG GATTACGCCA ACGACCAGGA AGTCGAGAAT
GCTCAATCGG AGGCCGTCGA GGAGGCATCA CGCCGTTCCC AACCGCTTAC GCAAGAGCAA
CAACGGATTC TGGCCGACTT GAGGCAATGG GCACAGCGCG CCAAGAACCA GACCGACTCC
AAGGCCAGAG CCATCCTAGA TTGGCTCTCA GCCAATCTGA AACCGGGAGG TCAGTGGAAT
GACCGCCGGG TGATCCTGTT CACCGAATAC CGCACCACCC ACCAGTGGAT GCACGAGATC
CTCGCCAGCC ATGGTTTCGG TGGCGAACGA CTCGGTCTGC TCCACGGAGG ACTCACTCAG
GATGAGCGGG AGCCCATCAA GGCAGCCTTC CAGGCATCTC CCAAGGATTC CCCCGTCCGC
ATCCTGCTCG CCACGGATGC GGCCTCCGAA GGTATCGACC TGCAGAACCA CTGCAATTGC
CTCATCCACC TGGAGATCCC CTACAACCCC AACGTGATGG AGCAGCGCAA CGGGCGTATC
GACCGTCACG GACAACGCGA GAAAGAGGTG CTGATCTGGC ACCCCGTCGA CGGCGGTGAC
AAAAGCCATG CATCGGTCGG TGGCCATGGT GACGACATTC TGCGTGCGCT GCGCAAACTG
GAGTCGATGC GCGCCGACAT GGGCAGCGTC AATCCGGTCA TCGCGCCCCA GATGTCCGGG
CTCATCGAAG GCTCGCTGAA GGATCTGGAC ACCCGCCTCG CGGAGGCCAA GATTGCCAAG
GCCAGGCGCT TCGTGCGCGC CGAACGCGAG CTGAAAGAGC GCGTCGCCAA GCTCCATGAA
CGACTCCTCG CCACCCAGCA GGATTTTCAC CTCACGCCCG ATCACATCCA GATGGCGGTG
AAGACTGGTC TCGCGCTAGC GGGCCGCCCC CCGTTGGAAC CCGTCGCCCT CGCAGATGCA
CCCCAAGGCA GCGCATTCAG GATGCCACCC CTATCGGGAT CATGGGCGCG CTGTCTGGAG
GGCCTGCGTC ACCCGCATAC CCAGCAGATA CGCCCCATCA CCTTTGACCA CGCTGTGGCC
AAGGGGCGAG ACGATGTCGT GTTGGTCCAC CTGAATCATC GACTGGTGCA GATGTGCCTG
AGGCTGTTGC GCGCCGAGGT CTGGGCGCAG GATGACGTGA AGAAACTCCA TCGCGTCACC
GTGCGCACAT TACCGGATGG CAGCATCGAG GGCCCGGCTG TGGTCGTCAT CTCGCGGCTG
GTCATCACCG GTGGCAACCA CCATCGCCTT CACGAGGAAC TGACCGTCTC GGGCGGCTAT
CTGCGCGATC AGTCGTTCCG GCGCGAAGAG GGTGTCACGC GTGTCCAGCA GTGGCTGGAC
GAGGCGCAGC CAGTCACTGC GAGCGATTCG CTACTCGATG CCATTCGGGT GCGCTTCGAT
CGCGCCCAGC CCGCCATCCT GCAAGCGGTC GACGCCCGCT CGAAGGATCG ACTCAAGTTT
CTGGCCAATA CTCTGCAGAC CCGCAAGCAA CAAGAGATGG ATGACATCGG TACCGTGCTC
GACGAGTTGG AGAAGGCTAT CCAGAGCGAG TTGAAGAAAG ACCAACAGCC CGAGCAGCTT
TCGCTGTTCA CCGAGGACGA GCGCACTCAG CTCAGACGCG ATACCGCCGC GCTGGAGGCA
CGCCTCGCGC GCATCCCGGC CGAGCGCATC CAAGAGGTCC AGGCCATCGA AACCCGCTAT
TCCAAGCTCG ACGATCGCAC TTTCCCTGTT GCCGTCGTCT TCTTGGTTCC CGAGTCAGCC
ATGCAAGGGG ATGCAGCATG A
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| Protein sequence | MEISNDQKHH TYRTRPEPGQ LVEVRRRQWV VADVASSKLE SASASQNCVT LSSIDEDGLG
EELEVIWEIE PGAQVIERAG LPSITGQDHS DTLEAFLDAV RWGAATNADR GFLQAPFRSG
VSIEDFQLDP LVRAIDMARV NLLIADDVGL GKTIEAGLVI QEMLLRHRAR TVLIICPASL
QEKWRIEMLE KFGLDFRVVD TAYIKQLRRE RGIHANPWTS HPRLIASMDW VKSGEGLRAM
RDVLPPHAGH PRKFDLLVVD EAHNIAPAAG AHYALESQRT RFIRAISPHF QHRLFLTATP
HNGYTESFTS LLELLDDQRF ARNILPDEKQ LSQVMIRRLK SDLVDADGKP LYAQRKLQAL
AVPYTDEERE IHQKLNDYCA SREKDAEKTG STFGTSFVNQ LLKKRLFSSP AAFASTLEKH
VASLSNGAKP KGRDAMAERI LRKAILKADE DYANDQEVEN AQSEAVEEAS RRSQPLTQEQ
QRILADLRQW AQRAKNQTDS KARAILDWLS ANLKPGGQWN DRRVILFTEY RTTHQWMHEI
LASHGFGGER LGLLHGGLTQ DEREPIKAAF QASPKDSPVR ILLATDAASE GIDLQNHCNC
LIHLEIPYNP NVMEQRNGRI DRHGQREKEV LIWHPVDGGD KSHASVGGHG DDILRALRKL
ESMRADMGSV NPVIAPQMSG LIEGSLKDLD TRLAEAKIAK ARRFVRAERE LKERVAKLHE
RLLATQQDFH LTPDHIQMAV KTGLALAGRP PLEPVALADA PQGSAFRMPP LSGSWARCLE
GLRHPHTQQI RPITFDHAVA KGRDDVVLVH LNHRLVQMCL RLLRAEVWAQ DDVKKLHRVT
VRTLPDGSIE GPAVVVISRL VITGGNHHRL HEELTVSGGY LRDQSFRREE GVTRVQQWLD
EAQPVTASDS LLDAIRVRFD RAQPAILQAV DARSKDRLKF LANTLQTRKQ QEMDDIGTVL
DELEKAIQSE LKKDQQPEQL SLFTEDERTQ LRRDTAALEA RLARIPAERI QEVQAIETRY
SKLDDRTFPV AVVFLVPESA MQGDAA
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