Gene Ajs_2098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_2098 
Symbol 
ID4672953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp2219061 
End bp2220113 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content67% 
IMG OID639839175 
Productalcohol dehydrogenase 
Protein accessionYP_986349 
Protein GI121594453 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.302969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.315811 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTGTT ATTGCGTGAT GCACCATTCA AAGCCGCTTG AACTCGTCGA GCGTGAGACT 
CCGCAGCCCG TGGGAACCGA GGTGCTCGTG CGTGTGAAGG CCGCCGGCCT TTGCCACACC
GACCTGCACA TCTGGGAAGG TTTTTACGAC CTGGGCGGCG GCAAGCGCAT GAACCTGGCA
GACCGGGGCA TCAAGCCGCC CCTCATCCTC AGCCACGAAA TCTGTGGCGA GGTGGTGGCA
GCCGGACCGG ATGCCGGCGA AGTCCCGACC GGCTCCCGCT ACGTCATCCA CCCCTGGATC
GGCTGCGGCG AATGCCCCAC CTGCCTGCGC GGCGATGAAA ACCTGTGCCT GAAGGGCCGC
GCCCTTGGCG TGGCACGCCC CGGTGGCTTT GCCGATTACG TGATCGTTCC CCACCCGCGC
TACCTGGTCA ACATCGACGG TCTGGACGAT GCCGAGGCGG CGCCTCTGGC CTGCGCGGGC
GTGACGACCT ACAGCGCCAT CAAGAAACTG GGCGAAGGCA TCCACCGCGA ACCCGTCGTC
ATGATTGGTG CCGGAGGCCT GGGCCTGATG GCCATCGAGG TGCTGAAGGC CCTTGGCGGC
AAAGGCGCGA TCGTGGTGGA CATCGACCCT GCCAAGCGCG AAGCCGCGCT GGCAGCCGGC
GCGCTGGCAG TGATCGACGG CAAGGCTGCC GATGCGACCA GCCAGATCAT CGCGGCGACT
GAAGGCGGTG CCGGCCAGAT TCTGGACCTG GTGGGCTCGT CCGCCACCGT ATCGCTGGCC
ATGCAGAGCG CCCGGCGCGG CGGCCACATC GTCATCTGCG GGCTGATGGG CGGTGATCTG
ACCATCTCCC TGGCGACCAT CCCGCTGCGC CCGCTGTGCA TCGAGGGCAG CTACGTCGGC
ACCCTGGCCG AACTGCGAGA GCTGGTGGAG CTGGTCAAGC GCACCGGCAT GAAGTCGATT
CCGGTGTCGC GCCGCCCCAT GGCCCAGGTG AACCAGGCCA TCGACGACCT GCACCACGGC
AAGGTGATCG GGCGCGCAGT CCTGATCCCA TAA
 
Protein sequence
MRCYCVMHHS KPLELVERET PQPVGTEVLV RVKAAGLCHT DLHIWEGFYD LGGGKRMNLA 
DRGIKPPLIL SHEICGEVVA AGPDAGEVPT GSRYVIHPWI GCGECPTCLR GDENLCLKGR
ALGVARPGGF ADYVIVPHPR YLVNIDGLDD AEAAPLACAG VTTYSAIKKL GEGIHREPVV
MIGAGGLGLM AIEVLKALGG KGAIVVDIDP AKREAALAAG ALAVIDGKAA DATSQIIAAT
EGGAGQILDL VGSSATVSLA MQSARRGGHI VICGLMGGDL TISLATIPLR PLCIEGSYVG
TLAELRELVE LVKRTGMKSI PVSRRPMAQV NQAIDDLHHG KVIGRAVLIP