Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1943 |
Symbol | |
ID | 4673247 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | - |
Start bp | 2035308 |
End bp | 2036432 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639839024 |
Product | TonB-dependent receptor |
Protein accession | YP_986199 |
Protein GI | 121594303 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.330013 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.348823 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGTCA CGCGCATCAC GACGGCCGCG CAGCCGCAGT TCAACAAGCC GCTGGGTCAT CAGTTCGGCG AAGAGATCGC CTCCAGCGGG CTGAACCTGA AAGCCGCCAC CCGCGTGGCG GACGCCACCG TGCGCTACGG ACTGAACATC CATCGCTTCG AGATGAACGC CGTCCATGCC CGCCCGCCCG CCGCATCCAC CAGCAACGGG CGCGAAGAAA GCAGCGTGAA GGGACTGTTC GCCGAAGGCA GCATCCCACT GGGCGACCAG TTCCTCCTGG GGGCGGGCGC GCGCTACGAC TGGTACGGCT ACACCGACAA CCACGCGCAG CGTATCTCCA GCCGCGGCTT GAGCCCCAAC ATGTCTCTGA CCTGGATGGC GACCGACGCG CTGAGCGTGC GCGCGTCCGC AGGCACCGCC CTGCGCGGCG CGGGACTCAA GGAGGCGTTC TATGTGGACA ACACCCGCTG GCGGAACGAC CCCGGACTGC AGCCAGAAAA GGCCCGCAAC GTCGAGCTGG GCGTGAACTA CAACGAGGGC CCGTGGAGCG CTAAAGCCAC CGTGTTCCGC CAGCAGATCC GCAACTTCAT CTCCACCACC ACCGGCGCAA CCTGGGCCGT GGCCAACGTA GGTACGATGA AGTCCTCAGG CTACGAGGTC GGTGTGGCAT GGAATCGCAG CGTGTGGCGC AGCGGTCTTG CTGTGGCCAG CGCCAAGCCC CAGCTCAATG GCTACGACCT GGGCGATGAA GCCTACGGGC TGGGCGTGTC CACGGGCCGC AGCTGGAACC TGAACCTGGG CTACCGCATC CCCGCGTGGA ACCTGGACCT GGAATGGTTC GGGCGCTTCG TGGAGTCCAA GACCTCCACC GAATACCTGA TCTCCGAAGG CCGCACCGCC ACCAAGCGCA AGCCCGGCTT CGGCGTGCAC GACATCTACG TCAACTGGCA GCCCTACGGC AACGACCGCG TGCGCGTGAC CTTCGGCGCG CGCAACCTGC TCAACAAGTT CTACTACGAC CAGGGTAGCT ACGCCTACTA CGTGAGTACC GCTGGCGCCA TCAGTGGCCG GGGCTTCGCC GAGCCGGGCC GCAACGTACG CCTGGACGTG ACGTGGAAGT TCTGA
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Protein sequence | MKVTRITTAA QPQFNKPLGH QFGEEIASSG LNLKAATRVA DATVRYGLNI HRFEMNAVHA RPPAASTSNG REESSVKGLF AEGSIPLGDQ FLLGAGARYD WYGYTDNHAQ RISSRGLSPN MSLTWMATDA LSVRASAGTA LRGAGLKEAF YVDNTRWRND PGLQPEKARN VELGVNYNEG PWSAKATVFR QQIRNFISTT TGATWAVANV GTMKSSGYEV GVAWNRSVWR SGLAVASAKP QLNGYDLGDE AYGLGVSTGR SWNLNLGYRI PAWNLDLEWF GRFVESKTST EYLISEGRTA TKRKPGFGVH DIYVNWQPYG NDRVRVTFGA RNLLNKFYYD QGSYAYYVST AGAISGRGFA EPGRNVRLDV TWKF
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