Gene Ajs_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1562 
Symbol 
ID4674625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1613465 
End bp1613704 
Gene Length240 bp 
Protein Length79 aa 
Translation table11 
GC content63% 
IMG OID639838649 
Productphage transcriptional regulator, AlpA 
Protein accessionYP_985831 
Protein GI121593935 
COG category[K] Transcription 
COG ID[COG3311] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.544133 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.10217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGTTA CCTCGACCAC CTCTCCCTCT GCGCCCGCCG GACTTCATGC GCTGCGGCCC 
ACACTGCCCG AGACGGGATT CGTCCGCCAG AAGCTGCTGC TGAGCTTCGT CCCGTTCTCC
AAGTCCACGC TTTGGCGGCG TGTCAAAGAA GGGTTGTTCC CCGCCCCGAT TCGCCTGTCG
GTTGGGATCA CGGCATGGCG CGCAGAGGAT GTTCGGCGCT GGATTGCTGA GCAGGATTGA
 
Protein sequence
MQVTSTTSPS APAGLHALRP TLPETGFVRQ KLLLSFVPFS KSTLWRRVKE GLFPAPIRLS 
VGITAWRAED VRRWIAEQD