Gene Ajs_1556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1556 
Symbol 
ID4670781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1607893 
End bp1608897 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content67% 
IMG OID639838643 
Productphage P4 alpha zinc-binding domain-containing protein 
Protein accessionYP_985825 
Protein GI121593929 
COG category[S] Function unknown 
COG ID[COG4643] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.736837 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0581478 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAACG CTGAATACGC CGCCCGCATT GGGGCCGTCA AGCAACGCGC CCATGGCCGC 
TGGACGGAGA TCCTCGGCGC CTTGGGCCTG GACGAGCGCT TGCTCAAGCG CAAGCCCATG
CCCTGCCCCG TCTGCAAGGA TGGTGTGGAT CGCTTCCAGT ACACCGACAA GTTCGGCGAA
GGGAACTACC ACTGCCGCAA GTGCGGGCCA GGCGGCGGGT TCAAGCTGCT GCAGGCTTAC
AAGGGAATGG ACTTCCACAC CGCGCTGTGC GCCGTCGAGA AGCTGGTCGG CCTGCTGCCA
CCTGCGGCAC CTGCCGGCGA AGCCGCGCCG GATCGCATGA AAAAGCTGGT GCAGCGCATC
TGGAACGAAG CCCGACCGGT GACGCTTGGC GACGAAGTGG ACCGCTACCT GCGCGGCCGC
GGACTGGCCT TGAGCCAGTA CCCCGACTCG CTGCGGTTTC ACCCCGCCCT GGGCTACTAC
CAGAAAGAAG GCGCGGCCAA GGCCCGCAAG GTGGCCGAAT ACCCGGCCAT GCTGGCCAGC
GTGCGGGATG CCCAGGGCGC CGTGACGCTG CACCGGACTT ACCTGAACGC CGGCCGCAAG
CTGGATGCAC CCGATGCGAA GAAGGTGCTC TGCAGCGGCT TCGTCGGGGC AGCGGTCCGG
CTGGCCGAGG CAGCGGAAGA GCTTGCCGTG TGCGAAGGCA TAGAGACCGC GATCGCGGTC
TTCCTGGCCA CCGGCAAGCC CGTCTGGAGT GCCTTGAGCG CCGGCAATCT CGAAAAGCTC
TGGATCCCGG AGACCGTCAG GCGCCTGTGC ATCTACGGCG ACAACGATGC CGACGGCGAT
TTCACGGGAC AGGCCAGCGC CTACGCGCTG GCGCGTCGGG TCAAGCGCGA GGAGGCCCAA
AGCGGCCCGA GAACGGTCCA GGTGTTCCTG CCCAAGCTGG CAGGAACCGA TTGGGCCGAC
GTGTGGCTGC AGCGTCAAGA GTCCACGGTG CTGCGCGCCG CGTGA
 
Protein sequence
MQNAEYAARI GAVKQRAHGR WTEILGALGL DERLLKRKPM PCPVCKDGVD RFQYTDKFGE 
GNYHCRKCGP GGGFKLLQAY KGMDFHTALC AVEKLVGLLP PAAPAGEAAP DRMKKLVQRI
WNEARPVTLG DEVDRYLRGR GLALSQYPDS LRFHPALGYY QKEGAAKARK VAEYPAMLAS
VRDAQGAVTL HRTYLNAGRK LDAPDAKKVL CSGFVGAAVR LAEAAEELAV CEGIETAIAV
FLATGKPVWS ALSAGNLEKL WIPETVRRLC IYGDNDADGD FTGQASAYAL ARRVKREEAQ
SGPRTVQVFL PKLAGTDWAD VWLQRQESTV LRAA