| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1540 |
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| Symbol | |
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| ID | 4672319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1596217 |
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| End bp | 1596783 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639838627 |
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| Product | plasmid-like conjugative transfer protein TraE |
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| Protein accession | YP_985809 |
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| Protein GI | 121593913 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02761] type IV conjugative transfer system protein TraE |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.475003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.191593 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACTTCG ACCGGCTCAG AGGCGACCTC AAGGACATGC GCCGCCGCAA CCGGGGCCTG
GGCCTCGCCG TCGGGGCACT GGCCGCCGGC CTGTTCCTGG CGCTCGCCAT CATCATCAAC
CTGCTGGGCA CGGTACGCAC CGTCGTCGTG CCGCCCTCGC TCAGCAAGAC GTTCTGGGTC
ACCAGCGACC GTGCCTCCAG CGAATACCTG GAGCAGATGG GCAGCTTCGT CGCCTGGCTG
ATCCTGGACG TGACGCCTTC CACTATCGAC TGGAAGAAGG ACATCCTGCT GGGCTACGTC
GACCCGGCCC AGTACGGCCC GCTCAAGACA CGCCAGGAGG TCGAGGCCGA GCGGCTCAAG
CGCATCAACG CCGCCACCGC CTTCGCACCC CAGCAGCTCG TTGCCAGCGA AGACACCCAG
TCGCTCGTCG TGCGCGGGCG GCTGCGCACC CTGGTCAACG GCATGGAGAC CGCCAACGAC
CTCAAGGCCT ATCGCATCGA GTTCGGCCAT GCCGCGGCTC GCATGCACGT CATCGGATTC
AAGGAGGTGC CCTATGCGGT CAAGTGA
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| Protein sequence | MDFDRLRGDL KDMRRRNRGL GLAVGALAAG LFLALAIIIN LLGTVRTVVV PPSLSKTFWV
TSDRASSEYL EQMGSFVAWL ILDVTPSTID WKKDILLGYV DPAQYGPLKT RQEVEAERLK
RINAATAFAP QQLVASEDTQ SLVVRGRLRT LVNGMETAND LKAYRIEFGH AAARMHVIGF
KEVPYAVK
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