| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1337 |
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| Symbol | |
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| ID | 4674660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | + |
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| Start bp | 1405501 |
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| End bp | 1407198 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639838448 |
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| Product | phage integrase family protein |
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| Protein accession | YP_985632 |
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| Protein GI | 121593736 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.515892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.256556 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAACG CGCTGTCAGC GCCGCCCAGC ATGCTCACAG CCCCGACCTG GCCGGACGAG
GCTTCGTTGG CCGCATTCCG CGCCTGGCTT CAAGGGGTGC CGAGCCGCGC CGCGGTGGAT
CGCTATTTGC CTGATCGCCG GACTGCCGGC GCATCGGCGC GCTCCGTGAT CGGGCGGGTG
AAGCGCCAGC TCGTGGCCTT CGCGACGAGC CGTGCGCAGG CGGAACTGGC TTCCACACTC
GCGGCGGCCA GTCCATCGGA TCGGAAACTC GCCAGGGCAG CGACAGCCGC CATCGAGACG
CTGCGAGGGA TGCCGCGGCC GCAGCCCCTC ATCGGCGACG CCGTCGAGCG CTGGCTACCC
GTGCGGCTCG TGGACGTACT GCACGCGGCG GGCATTCGCA CGCTGGCCGA CCTGACCCTG
CGCGTGCCCA GGCGCCGGCG CTGGTGGGCC GGCATCGCGG GGCTCGGGCC GGCCGGCGCC
CGCCACATCG AGGCATTCTT TGCCCAACAT CCTGCGCTCA CCGAACGCGC TCGCGCGCTG
ATCACAGTGA ACCAGGCGCA GGAACTGATC CCCTGGGAGC GACTGGTCGT CCCCGACGAC
GTCGATGGCT CACGGGGTAC CTTCCGAGCG CCGCAAGCCA GCTGTGCGCT CGACGCCAGC
AACGATTACC AGGCCGTGAA CGCCTGGCTG TCGCTGCACG AGTCGGCGGC GACCCAGCGG
GCCTACCGCA AGGAAGCCGA ACGGCTGATC CTGTGGGCGA TCGTCGAGCG AGGGCGGGCC
CTTTCATCGC TGACCACCGA GGACGCCATT GCCTACCGCG CCTTCCTGCG TCACCCGGGC
CCTCGCGCGC GCTGGGTCGG CGCACCACAG CCGCGGTTGT CGCCCGCGTG GCGCCCCTTC
GCGGGAGAGC TCTCGGCGCG CTCCGCGGCT TACGCGCTGT CGGTACTCAA CGCCCTGTAC
CGCTGGCTCA TCGAGCAGCG CTACGTGCTG GCCAACCCTT TCGCCGGCGT CAAGGTGCGA
GGGAGCCGGC CGGCGCAGCT CGACACGTCA CACGCGTTCA CCGAGCACGA GTGGAAGCTC
CTCCGGGTCG TCGCCGACGG CCTGGAATGG TCCTACGGCT GGAGCGAGCC GGCAGCGCAG
CGGCTGCGTT TCATGCTGGA CTTCGCATAC GCCACGGGCC TGCGAATCAG CGAATTCGTG
GGCGCACGAC TCGGCGCGGT CGACTCGGAC GCACACGGCG ACACGTGGAT CGGGGTCGTC
GGCAAGGGAC ACAAGGCCGG CAAGGTCGTG CTCCCGCCGC TGGCCCGGGC CGCCCTTGAT
CGCTACCTCG TTCAACGGGG GCTGCCCGTG ACGCCTTCGA AGTGGCGTCC ATCGACCCCG
CTGATTGGCA GCCTTGGAGA GGATGGAAGT GGGATCTCCT CGTGGCGGCT ATGGCGAGTG
ATGAAGCGGT TCTTCGCCAC GGCGGCCGAA GTCGTGGAGG AAGCCACCCC GGCCCTTGCC
GAGAAGTTGC GCCTGGCCAC GCCGCACTGG ACGAGGCACA CGCATGCCAC CCACCTGCTC
GAAGGCGGCG CCGAGCTGAC CACGGTGCGC GACAACCTGC GGCACGCCTC GCTCGCCACG
ACCTCGATGT ACCTGCACAC CGACGATGCC CGACGGGCCA AGCAGGTGGC TGATCGGTTC
GCGGTGCCGC GTTCGTAG
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| Protein sequence | MENALSAPPS MLTAPTWPDE ASLAAFRAWL QGVPSRAAVD RYLPDRRTAG ASARSVIGRV
KRQLVAFATS RAQAELASTL AAASPSDRKL ARAATAAIET LRGMPRPQPL IGDAVERWLP
VRLVDVLHAA GIRTLADLTL RVPRRRRWWA GIAGLGPAGA RHIEAFFAQH PALTERARAL
ITVNQAQELI PWERLVVPDD VDGSRGTFRA PQASCALDAS NDYQAVNAWL SLHESAATQR
AYRKEAERLI LWAIVERGRA LSSLTTEDAI AYRAFLRHPG PRARWVGAPQ PRLSPAWRPF
AGELSARSAA YALSVLNALY RWLIEQRYVL ANPFAGVKVR GSRPAQLDTS HAFTEHEWKL
LRVVADGLEW SYGWSEPAAQ RLRFMLDFAY ATGLRISEFV GARLGAVDSD AHGDTWIGVV
GKGHKAGKVV LPPLARAALD RYLVQRGLPV TPSKWRPSTP LIGSLGEDGS GISSWRLWRV
MKRFFATAAE VVEEATPALA EKLRLATPHW TRHTHATHLL EGGAELTTVR DNLRHASLAT
TSMYLHTDDA RRAKQVADRF AVPRS
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