| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_1115 |
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| Symbol | |
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| ID | 4671250 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 1171135 |
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| End bp | 1172904 |
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| Gene Length | 1770 bp |
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| Protein Length | 589 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639838233 |
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| Product | putative bifunctional OHCU decarboxylase/allantoate amidohydrolase |
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| Protein accession | YP_985424 |
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| Protein GI | 121593528 |
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| COG category | [E] Amino acid transport and metabolism
[S] Function unknown |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases
[COG3195] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01879] amidase, hydantoinase/carbamoylase family
[TIGR03164] OHCU decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.845935 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.677429 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTGGA CCCTGGAACA ACTCAACGCC GCCTCCCCCG CCGAGGCCCT GCAGATGCTC
GACGGCCTGT ACGAGCATTC GCCCTGGATC GCCGAGGCGG CGCTGCAGCT GCGCCCCTTC
CGCTCGCTGG CCCAGCTCAA GTACGCCATG GTGCAGGTGC TGAACGGCGC CGGCGTGGAA
CGGCAGTTGG AGCTGATCCG CGCCCACCCC GAGCTGGCGG GCAAGGCCAT GGTGGCGCAG
GCGCTCACGG CCGAGTCCAC GAACGAGCAA AGCCAGGCGG GCCTGACCCA CTGCACGCCC
GAGGAGTTCG CGCGCATCCA GCAACTGAAT ACCGACTACA ACGCCCGCTT CGGCTTTCCC
TTCATCCTGG CGGTGCGCGG GCCGCGCGGC ACGGGACTGT CGAGGCAGGA GATCATCGCC
ACCTTCGCAC GTCGCCTGTC CAACCACCCC GACTTCGAGC GCGCCGAGGC ACTGCGCAAC
ATCCACCGCA TTGCCGAGAT CCGCCTGAAC GACAAGTTCG GCGCTGAGCC GGTGCTGGGC
AACGACGTCT GGGACTGGCA CGAGCGCCTG GCCCAGCACA GCGACCCGGG CTATGCCGAG
AAAGGCCAGC TCACCGTCAC CTACCTCACC GATGCGCACC GCGCCTGCGC CCAGCGCATC
AGCCACTGGA TGCGCGACTG CGGCTTTGAC GAGGTCGAGA TCGACGCCGT GGGGAACGTG
GTCGGCCGCT ACAAGCCGGC CACACCCGAC GGCAAGTATT TGATGACCGG CAGCCACTAC
GACACCGTGC GCAACGGCGG CAAGTACGAC GGGCGTCTGG GCATCTTCGT GCCCATGGCC
TGCGTGCGCG AGCTGCACCG CCAAGCCAAG CGCCTGCCGT TCGGCATCGA GGTGGTGGCG
TTTGCCGAGG AGGAAGGCCA GCGCTACAAG GCCACCTTCC TGGGCTCGGG CGCGCTCATC
GGCGACTTCC GCAACGAATG GCTGGACCAG AAGGACGCCG ACGGCATCCC CATGCGCGAG
GCCATGCAGC ACGCCGGTCT GTGCATTGGC GACATCCCGA AGCTGCGGCG CGATGCTGCC
CGCTACCTGG GCTTCATCGA GGTGCACATC GAGCAGGGCC CGGTGCTCAA CGAACTGGAT
ATCCCGCTGG GCGTGGTCAC GTCCATCAAC GGCGGCGTGC GCTACGTCTG CGAGATGCTG
GGCATGGCCA GCCACGCGGG CACCACGCCC ATGGACCGCC GCCGCGACGC CGCCCTGGGC
GTGGCCGAGC TGGCGCTGTA CATGGAGCAG CGCGCCGCGC GCGATGGCGA CAGCGTGGCC
ACCATCGGCA TGCTGCAGGT GCCAGGCGGC TCCATCAACG TGGTGCCGGG CAAGTGCAGT
TTCAGCATGG ACATGCGCGC GCCCACCGAT GCGCAGCGCG ATGCCATGGT GGCCGACGTG
CTGGCCCAGC TGGAGGAAAT CGCCCAACGC CGCGGCCTGC AGTACAAGGC CGAGCTGGCC
ATGAAGGTCG CCGCAGCCCC CAGCGCCCCG GCCTGGCAGC ACCGCTGGGA GAAGGCCGTC
GACGCCCTGG GCGTCCCCGT CTACCGCATG CCCAGCGGCG CCGGCCATGA CGCCATGAAA
CTGCACGAAA TCATGCCGCA GGCCATGCTG TTCGTGCGCG GCCTGCACGG CGGCATCAGC
CACAACCCGC TGGAATCCAG CACCGCCGAC GACATCCAGT TGGCGGTGGA TGCCTTCAGC
CATGTGCTGC AGCAGTTGGC CGCCGAATAA
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| Protein sequence | MAWTLEQLNA ASPAEALQML DGLYEHSPWI AEAALQLRPF RSLAQLKYAM VQVLNGAGVE
RQLELIRAHP ELAGKAMVAQ ALTAESTNEQ SQAGLTHCTP EEFARIQQLN TDYNARFGFP
FILAVRGPRG TGLSRQEIIA TFARRLSNHP DFERAEALRN IHRIAEIRLN DKFGAEPVLG
NDVWDWHERL AQHSDPGYAE KGQLTVTYLT DAHRACAQRI SHWMRDCGFD EVEIDAVGNV
VGRYKPATPD GKYLMTGSHY DTVRNGGKYD GRLGIFVPMA CVRELHRQAK RLPFGIEVVA
FAEEEGQRYK ATFLGSGALI GDFRNEWLDQ KDADGIPMRE AMQHAGLCIG DIPKLRRDAA
RYLGFIEVHI EQGPVLNELD IPLGVVTSIN GGVRYVCEML GMASHAGTTP MDRRRDAALG
VAELALYMEQ RAARDGDSVA TIGMLQVPGG SINVVPGKCS FSMDMRAPTD AQRDAMVADV
LAQLEEIAQR RGLQYKAELA MKVAAAPSAP AWQHRWEKAV DALGVPVYRM PSGAGHDAMK
LHEIMPQAML FVRGLHGGIS HNPLESSTAD DIQLAVDAFS HVLQQLAAE
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