Gene Ajs_1048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_1048 
Symbol 
ID4671344 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp1099010 
End bp1099669 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content70% 
IMG OID639838167 
Productnitroreductase 
Protein accessionYP_985359 
Protein GI121593463 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.043093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGTTA CCCAAGCCCT GCGTGCGCGC CGCTCGGTGC GCGCCTTCCT GCCCGACGCG 
CCCCCCGCAG CGACTGTGCA GACGATTCTT CAAGAAGCCG CACAGGCGGC CTCCGGCGGC
AATCTGCAGC CCTGGCGCGT GGTGGCCCTC ACGGGCGCGC TGCCGCAGGA GTTGCTGGCG
GTCGTCGCCC AGGCGCAACC CGAGGAAGGA CCGGACAACC AGTCCTACCC GCCGGGCCTG
TGGGAGCCCT ACCGCACACG CCGCTTCGCC AACGGCGAAG ACCTGTACCG CAGCATCGGC
ATTCCGCGCG AGGACAAGGC CGGGCGCCTG CAGCAGCTGG CCAAGAATGC CGAGCTGTTT
GGCGCGCCCG TGGGCATCTT CGTGTGCGTG GACGAGCGCA TGGGTCAGCC GCAATGGGCT
GATCTGGGGA TCTACCTGCA GTCGCTGATG CTGCTGGCGG TGCAGCATGG GCTGGCCACC
TGCGCCCAGG GCTTCTGGCG CCGCTATGCC GGCACGCTGC AGCAGCAGCT GGGACTGCCC
GAGCCGTACC GCGTGGCCTT TGGCGTGGCG CTGGGCTATG AGGATGCGGC GGCGCCCATC
AATACCCTGC GCTCCTCGCG GGCTCCCTGG GCCGAGTGGG GCGAGATGCG CGGGTTCTGA
 
Protein sequence
MEVTQALRAR RSVRAFLPDA PPAATVQTIL QEAAQAASGG NLQPWRVVAL TGALPQELLA 
VVAQAQPEEG PDNQSYPPGL WEPYRTRRFA NGEDLYRSIG IPREDKAGRL QQLAKNAELF
GAPVGIFVCV DERMGQPQWA DLGIYLQSLM LLAVQHGLAT CAQGFWRRYA GTLQQQLGLP
EPYRVAFGVA LGYEDAAAPI NTLRSSRAPW AEWGEMRGF