Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_1048 |
Symbol | |
ID | 4671344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 1099010 |
End bp | 1099669 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639838167 |
Product | nitroreductase |
Protein accession | YP_985359 |
Protein GI | 121593463 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.043093 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAGTTA CCCAAGCCCT GCGTGCGCGC CGCTCGGTGC GCGCCTTCCT GCCCGACGCG CCCCCCGCAG CGACTGTGCA GACGATTCTT CAAGAAGCCG CACAGGCGGC CTCCGGCGGC AATCTGCAGC CCTGGCGCGT GGTGGCCCTC ACGGGCGCGC TGCCGCAGGA GTTGCTGGCG GTCGTCGCCC AGGCGCAACC CGAGGAAGGA CCGGACAACC AGTCCTACCC GCCGGGCCTG TGGGAGCCCT ACCGCACACG CCGCTTCGCC AACGGCGAAG ACCTGTACCG CAGCATCGGC ATTCCGCGCG AGGACAAGGC CGGGCGCCTG CAGCAGCTGG CCAAGAATGC CGAGCTGTTT GGCGCGCCCG TGGGCATCTT CGTGTGCGTG GACGAGCGCA TGGGTCAGCC GCAATGGGCT GATCTGGGGA TCTACCTGCA GTCGCTGATG CTGCTGGCGG TGCAGCATGG GCTGGCCACC TGCGCCCAGG GCTTCTGGCG CCGCTATGCC GGCACGCTGC AGCAGCAGCT GGGACTGCCC GAGCCGTACC GCGTGGCCTT TGGCGTGGCG CTGGGCTATG AGGATGCGGC GGCGCCCATC AATACCCTGC GCTCCTCGCG GGCTCCCTGG GCCGAGTGGG GCGAGATGCG CGGGTTCTGA
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Protein sequence | MEVTQALRAR RSVRAFLPDA PPAATVQTIL QEAAQAASGG NLQPWRVVAL TGALPQELLA VVAQAQPEEG PDNQSYPPGL WEPYRTRRFA NGEDLYRSIG IPREDKAGRL QQLAKNAELF GAPVGIFVCV DERMGQPQWA DLGIYLQSLM LLAVQHGLAT CAQGFWRRYA GTLQQQLGLP EPYRVAFGVA LGYEDAAAPI NTLRSSRAPW AEWGEMRGF
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