Gene Ajs_0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0946 
Symbol 
ID4672553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp988616 
End bp988900 
Gene Length285 bp 
Protein Length94 aa 
Translation table11 
GC content69% 
IMG OID639838068 
Producthelix-turn-helix domain-containing protein 
Protein accessionYP_985262 
Protein GI121593366 
COG category[K] Transcription 
COG ID[COG2944] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000318206 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000295064 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCACCG CATTCGAGAG CATCAAGCAG GGCCTGCAAG AGGCCATCGC CCACGCCAGG 
GGCGACGAGA GGGGCGTGCG CGTGCATCGC CCGCGCGCCA TCGACGTGAA GGCCGTGCGC
GCCAAGGTGG GCATGACCCA GGAACAGTTC GCGGCCCGCT TCGGGTTCTC TACCGCGACG
TTGCGGCACT GGGAGCGTGG CGACCGTACC CCGCACGGCC CGGCGCTGGT GCTGCTCAAC
GTGATCGAGC GCAACCCGCA AGCCGTCATC GAGGCTCTGG CCTGA
 
Protein sequence
MSTAFESIKQ GLQEAIAHAR GDERGVRVHR PRAIDVKAVR AKVGMTQEQF AARFGFSTAT 
LRHWERGDRT PHGPALVLLN VIERNPQAVI EALA