Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ajs_0878 |
Symbol | |
ID | 4670552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidovorax sp. JS42 |
Kingdom | Bacteria |
Replicon accession | NC_008782 |
Strand | + |
Start bp | 928288 |
End bp | 929517 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 639838001 |
Product | phospholipase D/transphosphatidylase |
Protein accession | YP_985196 |
Protein GI | 121593300 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0211881 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTCGCCC CCACGCGCGC GCACGCTACC GGCCGAGACC ACCAGATCCA GCTGCTGCAG GGCACGCAGG AGTTGTTCCC GGCGCTGATC GCCGAGATGG ATGCGGCGCT GTCCGATATC CAGTTCGAGA CCTACATCTT TGACTGCACT GGCGCGGGCG CCGACGTGGC CGAGGCGCTG ATGCGCGCAG CCCGGCGCGG CGTGCGCGTG CACCTGGCGC TGGACGGCGT GGGCACGGGG CGGCTGCCCG AGCCTTGGCG CACCCGCATG GTGCAGGCCG GCGTGCACGT GCAGGTGTAT TCGCCGCTCG GCCCGCTGGG CCTGCTGCTG CCGATGCGCT GGCGCCGGCT GCACCGCAAG CTGTGCGTGG TGGATGGCTG CGTGCTGTTC TGCGGCGGCA TCAACGTGCT GGACGACTTC CACGACCCCA ACCACGGCGC GCTCACCGCG CCGCGCTTTG ACTTTGCCGT GCGCGCCGAG GGCAGCCTGG TGCAGCAGGC CAGCGAGACC ATGGAGCAAC TGTGGTGGCG CATGCGCGCG GTGCGCGACG TACGCCAGCG CCGCCTGTCG CTGGCGCTGG CCGACCTGCG CGCCGCCAGC GCCGCACGCC TGGCGGCGCG GCGCGCCGAG AGCCGTGCGC GGGGCATGCG CGCCGAGCTG GTGCTGCGCG ACAACGTGCG CAACCGTGCA TGCATCGAGC GCGCCTACCT GCGCGCCATT GCCCGCGCGC GGCATGAGAT CATCATCGCC AACGCCTACT TCGTGCCCGG TGGCAAGCTG CGCCGCGCGC TGGTGCTGGC GGCGCGGCGC GGCGTGCGCG TACAGCTGCT GCTGCAGGGG CGGTACGAAT ACTTCATGCA ATACCACGCA GCGCGGCCGG TGTACGGCAC GCTGCTGGCG GCGGGCGTGG AGATTCATGA ATACGCGCCC AGCTTCCTGC ACGCCAAGGT GGCGGTGATC GACGCGGACA GCCGCCGCGC CTGGGCCACG GTGGGCTCGT CCAACCTGGA CCCGCTGTCG CTGCTGCTGG CGCGCGAGGC CAATGTGATC GTGCGCGACG CCCCCTTTGC CCAGGACCTG CGCGAGCGGC TGCGCCACGC CATGGCCCAC GAGGGCCGCC AGCTTGACCC GCAGCGCTAC GCCGAACGCC CCTGGCGCGA GCGCGCGCTG GACCGCATCG CCTTCGGCAT CATGCGCGCG GCCCTGTGGG TGACGGGCAA CCGCTACTGA
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Protein sequence | MVAPTRAHAT GRDHQIQLLQ GTQELFPALI AEMDAALSDI QFETYIFDCT GAGADVAEAL MRAARRGVRV HLALDGVGTG RLPEPWRTRM VQAGVHVQVY SPLGPLGLLL PMRWRRLHRK LCVVDGCVLF CGGINVLDDF HDPNHGALTA PRFDFAVRAE GSLVQQASET MEQLWWRMRA VRDVRQRRLS LALADLRAAS AARLAARRAE SRARGMRAEL VLRDNVRNRA CIERAYLRAI ARARHEIIIA NAYFVPGGKL RRALVLAARR GVRVQLLLQG RYEYFMQYHA ARPVYGTLLA AGVEIHEYAP SFLHAKVAVI DADSRRAWAT VGSSNLDPLS LLLAREANVI VRDAPFAQDL RERLRHAMAH EGRQLDPQRY AERPWRERAL DRIAFGIMRA ALWVTGNRY
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