Gene Ajs_0855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0855 
Symbol 
ID4673632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp901231 
End bp902292 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content68% 
IMG OID639837978 
Producthypothetical protein 
Protein accessionYP_985173 
Protein GI121593277 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.898803 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGCTTT TCGTCAACGC GGGGGCGCTC AAGAATGGGG CTGCCCCCAT TTATTCAAAT 
ACCGAGGAGA TCCCCATGGC ACTGCGCCGC ACCCTGCTGT CCACCCTGGC CGCCTGCGCC
GCCGCTGCGG CTTTCGCACC CCTGGCGCAC GCCCAGGCGG GCGACTACCC CAACCGCCCC
ATCAAGCTGA TCGTGCCGTT CGCGCCCGGC GGCTCCACCG ACATGGTGGC CCGCCTGCTG
GCCGACAAAA TGGGCCCCAT CCTGGGCAAG GCCGTGGTGG TGGACAACAA GGGCGGAGCC
GGCGGCTCCA TCGGCGCAGA CGCCATCGCC AAGGCGGCAC CGGACGGCTA CACCATCGGC
ATGGCCACGG TGAGCACCCA CGGCGCCAAC CCCGCCATCT ACGCCAAGCT GCCGTATGAC
GCGGTGAAGG ACTTCGCCCC CATCACCAAC GTGATGAGCG TGCCCAGCGT CTTCGTGGTG
CACCCCAGCG TGCCCGCCAA GACCATGCAG GAGTTCGTGG CGCTGGCCAA GGCCAACCCC
GGCAAGTACA CCTTCGCCTC GCCAGGCACG GGCTCGCTGG GGCATGCCAA CATCGAGAAC
TTCATGAACC TGGCGGGCAT CGACCTGCTG CACATCCCCT ACAAGGGCGC GGGCCAGGCC
GCGACCGATG CGCTGGCTGG CCAGGTCAAC GCGATGACGG ACAACCTGCC CTCCACGCTG
GCCAACATCC AGTCGGGCAA GCTGCGCCCG CTGGCCGTGC TGGCCTTGAA GCGCAGTCCC
GTGCTGCCCG ACGTGCCAAC CTACACCGAG CTGGGCTACG CCGGCATGGG TGACGGCGGG
TGGTTCGGCC TGGTGGCGCC CGCGGGCACG CCCAAGGAGA TCATCGCCAA GCTGAACGCC
GCCGCGCACA AGGCCATGGC CCAGCCCGAC TACCTGGAGA AGCAAAAGAG CATCTCCGGC
GAATCCATGG CCAACACGCC CGAGCAGTTT GCCAAGCAGA TCGACGCCGC CATCGCGCGC
TACACGGCCG TGGCCAAGCG CGCCAACATC AAGCTGGACT GA
 
Protein sequence
MSLFVNAGAL KNGAAPIYSN TEEIPMALRR TLLSTLAACA AAAAFAPLAH AQAGDYPNRP 
IKLIVPFAPG GSTDMVARLL ADKMGPILGK AVVVDNKGGA GGSIGADAIA KAAPDGYTIG
MATVSTHGAN PAIYAKLPYD AVKDFAPITN VMSVPSVFVV HPSVPAKTMQ EFVALAKANP
GKYTFASPGT GSLGHANIEN FMNLAGIDLL HIPYKGAGQA ATDALAGQVN AMTDNLPSTL
ANIQSGKLRP LAVLALKRSP VLPDVPTYTE LGYAGMGDGG WFGLVAPAGT PKEIIAKLNA
AAHKAMAQPD YLEKQKSISG ESMANTPEQF AKQIDAAIAR YTAVAKRANI KLD