| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ajs_0833 |
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| Symbol | |
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| ID | 4672497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidovorax sp. JS42 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008782 |
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| Strand | - |
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| Start bp | 875015 |
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| End bp | 880312 |
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| Gene Length | 5298 bp |
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| Protein Length | 1765 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639837955 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_985151 |
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| Protein GI | 121593255 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1205] Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.888983 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGATGACG TTTTTCAGTT TCGCAATCAA TTAGTCGAGC GCTACAGCAA CTTCTCACGC
AGCTTTGTCC GCATTGCCGC TCCCGACATT CAACGAGAAG TCGAGAGCCA GTACCAAGAT
GGCCGCTACT GGCCAGAGCC TCTCGTACAG ATCAACCCCA ACTACCAACG CAAAGGCACG
GTGCAAACGC TGGCAACCGA GGGCGTGCTT CATCCCGTTT GCGCCGACGT ATTCCAGGCT
GGCAAGCCGG AGGGAAACCC GCAACCCCTG CACCTCTATG CCCATCAGTT GCAGGCACTC
GCCAAAGGCC AGTCAGGGCA AAGCTATGTC GTGACCACCG GGACCGGCTC CGGCAAATCG
CTGTCATTCT TCATTCCGAT CATCGACCGA ATCATCAAGG CCAAGGCAGA AGGCGGTAAA
CAACGCACCC GAGCCATCGT CATCTACCCG ATGAACGCCT TGGCCAACAG CCAGCTGGAA
GAGCTGGACA AATTCCTGCA CGGCTATGCC CCCGATCAGC GGCCCTTCAC CGTCGCCCGC
TACACCGGGC AAGAAAGCAA CCCTGAGCGC GATGCCATAG CCGACAACCC GCCGGACATT
CTGCTCACCA ACTTCATGAT GCTGGAGTAC ATACTCACCC GCTTTGACGA TGTGGATCGC
AAGGTGGTGG ACCATTGCGA AGGGCTGGAG TTTCTGGTGC TCGACGAGCT CCACACCTAC
CGAGGCCGCC AGGGGGCGGA TGTGGCCTTG CTCGTACGCC GCCTGCGTGA GCGGCTCAAG
GCCGACAAGC TGGTGTGCAT TGGCACCTCA GCCACCATGT CCAGCGCAGG CACCGAGGCG
GATCGCAATC GCACCGTCGC AGAAGTTGCC TCCAAACTCT TTGGCGCATG CATCAGCGAG
CATGACGTGA TTGGGGAGAC CCTTGAGCGC GTCACCGACC CGCTCAAGGA CGTTTCAGCC
ATCGCAGCCG AACTGCCTGC CGCCATCGCA CGAGAAACCC ACCAATGGCC TGACTTCCAA
ACCTTCCAGC GCGACCCTCT GGCCATCTGG GTGGAACTCA ACCTGGGCAT CGAGCTACCC
GACGACGAAC CACCGCGCCG CGCCAAGCCA AAAACCATCC AGACCGCCAG CGAAGATTTG
GCACGAGATG CCCAATGCTC TGTCTCTCAG GCCCGCATGG CCCTGCAGCG TTTTCTGGTG
GCCGCGCATG ACGTTCGCAC ACCCCAAGGT CGTCCGCCTT TCGCCTTCAA GCTACACCAG
TTCATCAGCG GCCCCGGCAA GGTGCTCACC ACGCTGGAGC CGACGGGCCA GCGCCACATC
ACCCTGGATG CGCAGCGCTT TGCCCCAGGG CGTCAGGCCG AGGGCGTGCA CCTCTACCCC
GCCCACTTTT GCCGAGACTG TGGGCAGGAG TACCTGCCAA TTTGGCAGTC TGGGCAGCAT
CCCACCATCT ACTTGCCGCG AGAAATCGAC GACGTCAGTG CCGACGACAG TGAGGATGCC
AGCTACGGTT TTCTGTGCCC AGTCAACCCA AAGCAGCCAT ACACCGGGCA GCTTGAAGAC
CTGCCTGAGA CTTGGCTGGA TCTGAGTCGC AATGAGCCCA AGATCAAACC CGCTTACAAA
AAGGCGATCC CTTACCATGT GGCCGTTGAT CCCCAGGGGC ACGAAGGTGC CGGAGAAGCC
TTCTGGTTTA TCCCCGGCAA ATTCCGCTTT TGCTTGAGTT GCGGCACGGT GCATGAGGCA
CACGGCAAAG ACGCCAACCG TCTGTCCAGC CTCTCTGGAG AGGGTCGATC ATCGGCCACA
ACGATGATCG CGCTCAGTGC CCTGCAGCAG CTCTTTGCAC TACCCAATCC CGCACATGGC
CAACCCGATC CCCGCAAGTT GCTGGGTTTC ACGGATAACA GACAGGATGC CGCCCTGCAA
GCCGGTCACT TCAACGACTT CATTTTTCTA CTCACTCTGC GTGCGGGCCT CATCGGCGCA
TTGCAGGACA ACTCTGGCGT ACTCGATGAA GAACAATTGG CCGAAGCCGT TTTCAAGGCG
CTAGGCTTTG GCCAAGTCGA TCAGGGCACG CTGGTCGAAT ACCTCCGATC ACCCAAGCTC
ATGGGACCGG CACGACAGCA GGCGCAGCGC ACACTACGCT TCATCATCGC CTATCGATTG
CTGCGCGACC TGCGCCGTGG CTGGCGCTAC AACAACCCGA ATCTTGACCA GTTGGGGCTG
TTGTCCATTC GCTATCGTGG CCTGGACGAA TTCTGCGCAG ACACTGGTGC ATTCGCAAAA
AACAAAGTGC TTGCCAAGCT CAAACCGGCT GACCGTGCCC GCTTGTGCAA CCTGCTTTTT
GACCACCTGC GCAGCCACCT GTGCCTCGAA ACCCGTTATC TCGATCCCGT CGAGCACGAC
AAAGCCCGTA CCAGCGGCCA CACCTACCTC ACCGAACGCT GGGCATTTGC TCCTGATGAA
AAACTGGAAA CGGGCCGCTA TCTCATCCTT GGCAAGCGCC CTGAATACAA AGGTAAACCG
CGTGCTGACT TGGTCACCGG AGGCCCTCGC TCACGCCTTC TGCGCCTCGT CAAAACATCC
AGCCTTTGGC AAGACTCGGT CTTCGCCACC GAAACCAAAC ACTGGAAAGA TACCGAGTGG
GTAGAACTGG TCCAAGACTT GCTGCACGCT GCGAGTAACT GCTATGTGCA AAAGTACGCC
ATCGATACGG ACCTCGCCGG CTGGCGCCTC AACGCCGCCG CATTGGATTG GTGCCTGACG
GCAGAACAGC CCCAGGACGA AAACAGCCGG ATCAACACGT TCTTCCGTGA GCTCTACCTC
AGCATCGCTG ACCTGCTGCG CTTGCCATCG CACCCCCTGT TCGAGTTCGA AGCACAGGAA
CATACCGCGC AAGTGGATGC GCCGCGCAGA CAACTACTGG AACAGCGCTT TCGCTACACC
GACAAAGACC GCAACGACTG GGCACAAAAC CCAGCACACG AAGCACCGCT GGAGCGCCTG
CCCGTAATGT TCTGCTCGCC CACCATGGAA CTGGGCGTGG ACATTTCCGC GCTCAACACC
GTGTACCTGC GCAACATGCC GCCCACCCCC GCCAACTACG CGCAGCGCAG CGGGCGTGCC
GGGCGCTCAG GCCAGCAAGC CCTGGTGGTG ACCTATTGCG CGGCACTCAG CCCGCACGAC
CAATGGTTCT TCCACCACGC CAACGACATG GTGCATGGCG TGGTGCGTGC GCCGACCCTG
GACTTGGCCA ATCGCGACCT CGTGGAAAGC CACCTGCAGG CGGTCTGGCT GGCCAGCACC
CAGATGAAGT TGGACCCCAG CATTGCCCCC ATGCTCGATC TCGATCAGGA AGGCAAACCA
CTGAAGCCGG CGTACCTGGA CGCCTTCACG ACTCCCGACG TGCGGGCCCG TGCACTGTCC
AGCGCCCACG GCGTGATTGA ACAACTACAG GCAGAACTCA ACGACAGCCA CTGGTATACA
CCCGAGTACG TGCAACAGGT CATTGACCGC GCTCCCCAGC AATTCTCGGG AGCCCTGGAG
CGCTGGCGCG TGCTATTTGA CGCGACCCGC CAACAAATGG ACATGGCCGA CCACATCGTC
AAAAGCCATA CCGCCTCGCA CGCCGAGCGC CAAAACGCCC AACGCCGCTA TGGCGATGCT
GCGCGCCAAT ATGCGGTGCT GCTTAAGTCA GGCAATGGCC AGAACACCGA CTTCTACACC
TACCGCTACC TCGCCAGCCA GGGTTTTCTG CCCGGCTACA ACTTCCCCCG CCTGCCCCTC
ATGGCCTGGA TTCCCGCGCG CGGCGGGCAA ACCACCAGTG GCAAGGACGA CGAAGGCAGC
ATGGTCAGCC GCCCGCGCTT TTTGGCACTC TCCGAATTCG GCCCACGCAG CCTCATCTAC
CACCAGGGTC GAATGTACCG CGTGGTGCGC GCCAAGCTCA ACGTCGGCAA TGCCGACCAC
ATCTCCGGCA ACAGCCAGCT ATCCACCATC ACATCCCTGG TGTGCAGCCA ATGCGGCTAC
GGCCACCTGG GAGAGCAGGG TGGCAGCCAA CCCTTGGTCA ACCGCTGTGA AAACTGCGAC
GCCCTGCTGA CCGAAACCGA CTGGGTGCGC GATCTCTATC GCATCGAAAC CGTGGAAACC
GTGCCGGTCG AGCGCATCTC CATCAACGAC GAAGAGCGCC AGCGCCAAGG CTTCGAGCTG
CAAACCACCT ACCGCTTCCT GCCCGGGCCC GATGGACAGA TTCAAAAACA GAAAGCCGAT
GTGCTGCAGG CAGAGCAGAT CCTCGCCGAA CTCACCTACG CGCCCGCCGC ACGCATCTGG
CGCATCAACC GGGGTTGGCG CCGCCGCAAA GACAAGGAAC AACTGGGCTT CTACATCAAC
CCCATCACCG GCACCTGGAG CAAGCAGGAC GCCCCCGATG CGAGCGACGA CACAAGCAAC
GACGACGCAC TCTTGGACAA AGTGCCCAAC CAGCGCATCG TGCCCTTCGT GGAAGACCAT
CGCAATTTGT TGATCCTTGC CCCGGTGCAT GCACTCCCGC TGGAGGCCAT GGCCACGCTA
CAAGCCGCCC TCAAGCGCGG CATCGAGATG TCCTTCCAGA TCGAAGAGTC CGAGCTGGTG
GCCGAGCCCT TGCCCAAGCA GGCGGAGCGC CGCGCATTGC TGTTCTACGA AGCCGCCGAA
GGCGGTGCGG GCGTACTCAC CCGCCTGGCC AATGACCCCG CCAGCCTTGC TCAAGTGGCC
AGCAACGCCC TGCAACTCAT CCATTACCGC CCCCCTGCCG ACGGCACCTG GCGACTGGAA
GACTTGCCCT CCCAAGAAGC CACCGACGCC CTGGGCAACC ACATTTGCGA AGCAGGCTGC
TACCAATGCC TGCTGTCGTA TTTCAACCAG CCAGACCACG AACACATCAA CCGCCGCAAC
CCCGAGGCGC TCGCTCTGTT GGTGGCACTG GCCAACGCCC AGGTGAAGCC CCGCCTCCTT
GAAGATGGTG AGCAGGCGGC CGCCAATGGC ACCCAGGCAG CCATAGCTGG CGACTCACTG
GAATCACGCT GGTTAGCAGC CCTGAACCAG GCGGGCCTCG CCCCACCCGA TGCACTGAAT
CTTCCCGTCA ACCAGGGCAC AGCCACCGCC GCAGCCCAGT ACAAGGCAGC CCGCGCACTG
GTTTTTCTCA CTCCGGTCGA TGCAGGTATC ACAGCAACCT TGCAGGACAA AGGCTGGCAG
GTGCTGGACT TTTCCGAGCC CGAGCATTGG GCCGCGCGCT TTGCTGAACA CCATGCCGTG
TTTGGCGCCA CCTGCTGA
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| Protein sequence | MDDVFQFRNQ LVERYSNFSR SFVRIAAPDI QREVESQYQD GRYWPEPLVQ INPNYQRKGT
VQTLATEGVL HPVCADVFQA GKPEGNPQPL HLYAHQLQAL AKGQSGQSYV VTTGTGSGKS
LSFFIPIIDR IIKAKAEGGK QRTRAIVIYP MNALANSQLE ELDKFLHGYA PDQRPFTVAR
YTGQESNPER DAIADNPPDI LLTNFMMLEY ILTRFDDVDR KVVDHCEGLE FLVLDELHTY
RGRQGADVAL LVRRLRERLK ADKLVCIGTS ATMSSAGTEA DRNRTVAEVA SKLFGACISE
HDVIGETLER VTDPLKDVSA IAAELPAAIA RETHQWPDFQ TFQRDPLAIW VELNLGIELP
DDEPPRRAKP KTIQTASEDL ARDAQCSVSQ ARMALQRFLV AAHDVRTPQG RPPFAFKLHQ
FISGPGKVLT TLEPTGQRHI TLDAQRFAPG RQAEGVHLYP AHFCRDCGQE YLPIWQSGQH
PTIYLPREID DVSADDSEDA SYGFLCPVNP KQPYTGQLED LPETWLDLSR NEPKIKPAYK
KAIPYHVAVD PQGHEGAGEA FWFIPGKFRF CLSCGTVHEA HGKDANRLSS LSGEGRSSAT
TMIALSALQQ LFALPNPAHG QPDPRKLLGF TDNRQDAALQ AGHFNDFIFL LTLRAGLIGA
LQDNSGVLDE EQLAEAVFKA LGFGQVDQGT LVEYLRSPKL MGPARQQAQR TLRFIIAYRL
LRDLRRGWRY NNPNLDQLGL LSIRYRGLDE FCADTGAFAK NKVLAKLKPA DRARLCNLLF
DHLRSHLCLE TRYLDPVEHD KARTSGHTYL TERWAFAPDE KLETGRYLIL GKRPEYKGKP
RADLVTGGPR SRLLRLVKTS SLWQDSVFAT ETKHWKDTEW VELVQDLLHA ASNCYVQKYA
IDTDLAGWRL NAAALDWCLT AEQPQDENSR INTFFRELYL SIADLLRLPS HPLFEFEAQE
HTAQVDAPRR QLLEQRFRYT DKDRNDWAQN PAHEAPLERL PVMFCSPTME LGVDISALNT
VYLRNMPPTP ANYAQRSGRA GRSGQQALVV TYCAALSPHD QWFFHHANDM VHGVVRAPTL
DLANRDLVES HLQAVWLAST QMKLDPSIAP MLDLDQEGKP LKPAYLDAFT TPDVRARALS
SAHGVIEQLQ AELNDSHWYT PEYVQQVIDR APQQFSGALE RWRVLFDATR QQMDMADHIV
KSHTASHAER QNAQRRYGDA ARQYAVLLKS GNGQNTDFYT YRYLASQGFL PGYNFPRLPL
MAWIPARGGQ TTSGKDDEGS MVSRPRFLAL SEFGPRSLIY HQGRMYRVVR AKLNVGNADH
ISGNSQLSTI TSLVCSQCGY GHLGEQGGSQ PLVNRCENCD ALLTETDWVR DLYRIETVET
VPVERISIND EERQRQGFEL QTTYRFLPGP DGQIQKQKAD VLQAEQILAE LTYAPAARIW
RINRGWRRRK DKEQLGFYIN PITGTWSKQD APDASDDTSN DDALLDKVPN QRIVPFVEDH
RNLLILAPVH ALPLEAMATL QAALKRGIEM SFQIEESELV AEPLPKQAER RALLFYEAAE
GGAGVLTRLA NDPASLAQVA SNALQLIHYR PPADGTWRLE DLPSQEATDA LGNHICEAGC
YQCLLSYFNQ PDHEHINRRN PEALALLVAL ANAQVKPRLL EDGEQAAANG TQAAIAGDSL
ESRWLAALNQ AGLAPPDALN LPVNQGTATA AAQYKAARAL VFLTPVDAGI TATLQDKGWQ
VLDFSEPEHW AARFAEHHAV FGATC
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