Gene Ajs_0187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAjs_0187 
Symbol 
ID4671018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidovorax sp. JS42 
KingdomBacteria 
Replicon accessionNC_008782 
Strand
Start bp204871 
End bp205848 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content67% 
IMG OID639837319 
Producthypothetical protein 
Protein accessionYP_984518 
Protein GI121592622 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3774] Mannosyltransferase OCH1 and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC CTGTTTCAAC CACGGCCTGG AAGCACCGTG GCGAACTCTG GTTGGCGCGC 
TGGTTGCGGC GTTGGTACAA GGTCCGCCCG CTGTGGCTGG AGGGCGCCCC CGCGCCTGAG
TTCACGTTGT ACTCAACGGG TGTGGCGGAC GTGGTCCGGG CACCCGCTGC CGCCATTCCT
CCCATAATTT GGGCGTACTG GCATGGCGCC ACGCCGCCGC TGGTGCGGCA CTGCTTTGAT
AACTGGCGGC GCCTGCATCC GCACTTCGAG ATCCGCATCC TGGACGAGCG CACCGCGCTG
CGATACCTGC CCGCCATCCC GGCCGCGCTG GATGGCGTCT CGGCCGCCAA GCGGGCCGAC
TGGATACGCC TGGAACTGCT GAGCCGCTAT GGCGGTATCT GGCTGGACGC CAGCACCATA
CTCACGCGGC CGCTGGATTG GGTGCTGGAG CAGCAGGCGC GCACCGGGGC CGATTTCGTG
GGCTATTACC TGCAGCGGTT TACCAGCGTG CCGGATCGCC CAGTGGTGGA AAACTGGTTC
ATGGCGGCAC CGCCGGCCAG TCCCTTCATC GAGGACCTGC GGCGCGAGTT CACCCAGGAG
GTCATTGCCC GCACGGGCGA GCAGTACATG GAGCACCTGC GTGCCCAGGG CCTGTACCAG
CAGGCCGTGC AATGTATCGA CGATCCGGTC TATTTGAGCA TGCATATGGC ACTGCAGGTC
GTATTGTTGC GCGGTGGCGG CTACCGTCTG TGCCTGGCCA AAGCCGAGGA TGGTCCTTTC
TATTACCACG TGCTGGGCCG CTGGAACCGC GCCGCGCTCA AGCTGCGCCT GCTGTTCGCG
CGCGTGCGCG GGCCGCTGCC GCCGCTGATC AAGCTGCGCG GGCCCGACCG TCGCCGGCTC
GACGATTACC TGGCGCGCGG CCTGTACCTG CCCGAGAGCG TGGCGGGACG CTGGCTGATG
GGCGATTCGC CCCGTTGA
 
Protein sequence
MTAPVSTTAW KHRGELWLAR WLRRWYKVRP LWLEGAPAPE FTLYSTGVAD VVRAPAAAIP 
PIIWAYWHGA TPPLVRHCFD NWRRLHPHFE IRILDERTAL RYLPAIPAAL DGVSAAKRAD
WIRLELLSRY GGIWLDASTI LTRPLDWVLE QQARTGADFV GYYLQRFTSV PDRPVVENWF
MAAPPASPFI EDLRREFTQE VIARTGEQYM EHLRAQGLYQ QAVQCIDDPV YLSMHMALQV
VLLRGGGYRL CLAKAEDGPF YYHVLGRWNR AALKLRLLFA RVRGPLPPLI KLRGPDRRRL
DDYLARGLYL PESVAGRWLM GDSPR