| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_2000 |
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| Symbol | |
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| ID | 8324100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | - |
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| Start bp | 2115940 |
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| End bp | 2117583 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644953125 |
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| Product | amino acid permease-associated region |
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| Protein accession | YP_003110575 |
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| Protein GI | 256372751 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0531] Amino acid transporters |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0734041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAAG GACCATGGGA GGACGAACTC GCCTCCCACC ATCACCACCA CGATCCTGAC
GCCGCGAGGC TCGCAGAGCT TGGTTATCGC CAAGAGCTCG ACCGCGTGAT GACGCTGTTC
GAGAACTTCT CGGTCGCGTT CTGCTACCTC TCACCGGTCG TCGGGGTCTA CTCGTTGTAC
GCGCTCAGCG TGGGGTCGGC AGGGCCTGCC TACCTGTGGC TCATCCCCGT CGTGGTGATC
GGCCAGCTGT TCGTCGCGCT CGTCTTCGGC GAGCTCGGCT CGAGTTATCC CATTGCCGGG
GCACTGTTCC AGTGGTCGAA GCGCCTGCTC GGCAACGGCT ACGGCTGGTG GGTCGGATGG
ATGTACGGCT GGGCGCTCAT CATCACGGTA GCGAGCGTGG ACACCGGCGT GCCTGGGTAC
TTCGCCTCGC TCGTCAACAA CGTGTTCGGC ACCCACTGGG ATGGCGCGGC TCCGAATGAC
ATCCTGCTCA TCTCGACCGG GTTCCTCGTC GTCCAGACCG CCTTCAACAT CTTCGGCGTT
CGCTTCCTCG GTTCGATCTC GCGGATCGGC ACGTGGTTCG AAGTGCTCGG TACCCTGGGC
GTCGCGGTGA TCTTGTTCTC CGTGGCGACG CACCACTCGT TCTCGTATCT GTTCTCGAGC
GCTGGGACGA CGCACGTCGC AACGAATCCG CTCGGGGTCA ACTTCATCGG GCACTGGTGG
ACCGGTGCGG CGTTGATCGC GATCCTCGGT CCGGTCTACA TCTTCTATGG GTTCGAGAGT
GCGGGCGACG TCGCCGAAGA GGTCGTCGAC GCGCAGCGTC GCGTGCCGCG CGCGATGGTG
AGCGCGCTCG TCGTCGGAGG GCTCGTGTCG ATGATCCTCG TCGCAGCACT CGACCTGGCG
ATCCCGTCAG GGCCGAAGGG CCTCGCGCTC GCGGCGACGG GGGGCGTCCC TGCGATCTTG
AGTGCGGCGA TCTCGTCCAA GCTCTTCCAG GATCTCATCT TGCTCGTGAT CACCTTCGCG
TTCTTCTCGT GCGGCACGGC GGTGCAAGGC GCAGGAGCTC GTCTCGCGTT CTCCTACGCC
CGAGACCACG CCGTCCCGGG GTGGCACTTC ATCCGCCGCA TCTCGCCACG CCGTCGCACC
CCGGTGGGCG CCATCTTGAT CGCGGCCATC ATCCCGGAAC TGCTGTCGTT CCTCGTGCAC
TTCACCCCGT CGAAGCCGAT CCACATCGGC TTCATCACCT ATCCAGCACA CGTGAACGCC
CTCTCTGCGC TCGTGAGCTT CGGTGTGTCC GGCATCTACA TCTCGTTCCA GATGGTGGTG
CTCGCTTACC TCATCGCACG GTTGCGAGGG TGGCGTCCAG AAGGTCCGTT CCAGCTCGGC
CGCTGGGCCG TCCCGGTGGC GGTGCTGGGG CTGATCTACG GCGTGGCGAT GATCGTGAAC
ATCGTCGCCC CCACCGGGCT CAACTCACCT CGCGGCGCAC TGTTCAACTT CGACTGGCTC
ACGCTGCTCG TCGTCTTCGT CATCGTGGTG ATCGGGGCGG TGTACTTTGC TATCGCCCGG
CCGCACATCT CTATCGCGGC CGCCACGGCG AGCCGTGAGC TCGACCAGAC GGACGGCGCT
GCCACCCCCG TCGAGCAGTC GTAG
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| Protein sequence | MPEGPWEDEL ASHHHHHDPD AARLAELGYR QELDRVMTLF ENFSVAFCYL SPVVGVYSLY
ALSVGSAGPA YLWLIPVVVI GQLFVALVFG ELGSSYPIAG ALFQWSKRLL GNGYGWWVGW
MYGWALIITV ASVDTGVPGY FASLVNNVFG THWDGAAPND ILLISTGFLV VQTAFNIFGV
RFLGSISRIG TWFEVLGTLG VAVILFSVAT HHSFSYLFSS AGTTHVATNP LGVNFIGHWW
TGAALIAILG PVYIFYGFES AGDVAEEVVD AQRRVPRAMV SALVVGGLVS MILVAALDLA
IPSGPKGLAL AATGGVPAIL SAAISSKLFQ DLILLVITFA FFSCGTAVQG AGARLAFSYA
RDHAVPGWHF IRRISPRRRT PVGAILIAAI IPELLSFLVH FTPSKPIHIG FITYPAHVNA
LSALVSFGVS GIYISFQMVV LAYLIARLRG WRPEGPFQLG RWAVPVAVLG LIYGVAMIVN
IVAPTGLNSP RGALFNFDWL TLLVVFVIVV IGAVYFAIAR PHISIAAATA SRELDQTDGA
ATPVEQS
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