Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Afer_1818 |
Symbol | |
ID | 8323912 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidimicrobium ferrooxidans DSM 10331 |
Kingdom | Bacteria |
Replicon accession | NC_013124 |
Strand | - |
Start bp | 1903551 |
End bp | 1904180 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644952949 |
Product | SNARE associated Golgi protein |
Protein accession | YP_003110405 |
Protein GI | 256372581 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.685944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGCGGTAT TCATTCGGCT TTTGCTGTCG GTTCCGACAT GGCTGGTCTT GGTCCTGGTC TTTGGCTTTC CAGCTCTCGA GTCGTCGATC TTTCTCGGGT TCATCTTCCC TGGCGAGACG TCGGTGGTGC TCGGCGGGGT GCTCGCTGCG GAGCACCGGT TCCCGGTGTG GGAGTCAGGA TCACTGGCTG CGCTGGGGGC CATCGTCGGT GACTCGGTCG GGTTCTGGGT GGGGCGCCGT TTCGGCGAGC CGCTCCTTGC CAAGGTCCCG GAGCGCCTGC TCTCGAAGCG ACAACGTGAC CGAGCGGTTG GATTCGTCCA ACGCAGGGGA GCACTCGGCG TCGTCGTCGG TCGCTTCACG ACCGTCCTTC GTGTGCTGGT GCCGGGCATC GCGGGCATGG CCGAGATGCC CTATCGTCGT CGCTTTCTGC CGGCCAACGT GGTAGGTGGC GTCGGGTGGG CAGCGCTCTA CACGGGTCTC GGTTACGTGG CTGGAAGGAA CTACAGCTCG GTCCTCACCT CGGCAAGCCT GACCAGTACG GCTGTGCTGG CGGCGATCGT GGTGGTGGCG CTCGGACTCT GGTTGTGGCA CCACGTCATC ACGCCGCGGC GCGACCGCGC CGCCGGTTGA
|
Protein sequence | MAVFIRLLLS VPTWLVLVLV FGFPALESSI FLGFIFPGET SVVLGGVLAA EHRFPVWESG SLAALGAIVG DSVGFWVGRR FGEPLLAKVP ERLLSKRQRD RAVGFVQRRG ALGVVVGRFT TVLRVLVPGI AGMAEMPYRR RFLPANVVGG VGWAALYTGL GYVAGRNYSS VLTSASLTST AVLAAIVVVA LGLWLWHHVI TPRRDRAAG
|
| |