Gene Afer_1620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1620 
Symbol 
ID8323711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1709907 
End bp1710299 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content65% 
IMG OID644952754 
ProductPilT protein domain protein 
Protein accessionYP_003110212 
Protein GI256372388 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTCTTCT ACCTCGACAC GTCGGCGGCG GCCAAGCTCG TTGTCGCCGA ACCGGCGTCA 
GAAGCCATGG CATCGTGGGC GGCCAGCCAC GAAACCCAGG TGATTGCCAG TGACTTGCTG
CGCACCGAGC TCCTTCGGGC GACCCGGCGC GCGGCCCCCG ATCGGATGCA GCGCGCTCGA
TCAGTACTTG ACGCTCTCAC CTTGTTCAAC CTCACCTCTG CCACGCTCGA ACGGGCGGCC
ACCCTTGACC CCGAAGAGTT GCGGAGTCTG GACGCGCTCC ATCTTGCCGC AGCTCTGGAA
CTGGGTGACG AGCTCGACGG CATCGTCACC TACGACAACC GTATGGCGGC GGCGGCCTCC
CAGTACGGCG TCGCGGTGAT AGTGCCGACA TGA
 
Protein sequence
MVFYLDTSAA AKLVVAEPAS EAMASWAASH ETQVIASDLL RTELLRATRR AAPDRMQRAR 
SVLDALTLFN LTSATLERAA TLDPEELRSL DALHLAAALE LGDELDGIVT YDNRMAAAAS
QYGVAVIVPT