| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Afer_1606 |
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| Symbol | |
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| ID | 8323697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidimicrobium ferrooxidans DSM 10331 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013124 |
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| Strand | + |
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| Start bp | 1694496 |
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| End bp | 1696478 |
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| Gene Length | 1983 bp |
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| Protein Length | 660 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644952743 |
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| Product | ATP-dependent metalloprotease FtsH |
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| Protein accession | YP_003110201 |
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| Protein GI | 256372377 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0465] ATP-dependent Zn proteases |
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| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH
[TIGR01242] 26S proteasome subunit P45 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCCAT CGTCCCAACG CCCCTCGCCA CGAGGCTCGC GTCAGTCGCC GTCGCCCGAC
CAGCGCGGGC GCATTGCCTT CGCGATCCTC GCAACGCTCG TCGTCGCCGT GCTGCTACTG
ACTCTCTTCA GCCACGCCCC GAGCGGACAG CCCCTTGGCT ACAGCACCTT CATCCACGAC
GTACAGGCCA AGCAGGTTCG CACGGCCGTC CTCAACAACA CCACGGGTCA GATCACCGGC
TCGCTGACGA ACGGTACTGC CTACAGCGTC ACCGGTCCGC TGCCCTACAC CTCGAGCGAA
CTCAGCACGC TCTCGAAGGC CCACGTCCAG GTGAGCTACA TCACCCCCGG GCCTGGCATC
GCGTCCACCA TCATCGAGTA CGTCATCTTC TTCGGGATCT TCATCGGGAT CTGGGTCTAC
CTCACGCGGC GCACGCAGGG GTCGGTCAAC GGCATCATGA GCGTGGGTCG CTCGCGCGCG
AAGACCTACA CCACGGAACG CCCGAAGACG ACGTTCGACG ACGTGGCCGG CTACCAGGGC
GTCAAGGGTG AGGTGAAGGA GGTCGTCGAC TTCCTCCGCG ATCCCAGCCG CTTCTCGCAG
CTCGGTGCTC GGATCCCGAA GGGCATCTTG CTCGTCGGTC CTCCGGGAAC CGGCAAGACG
CTGCTCGCCC GTGCCGTCGC GGGCGAGGCT GGCGTGCCGT TCATGTCCGT GTCCGGTTCC
GACTTCATGG AGATGTTCGT GGGAGTCGGC GCCGCACGCG TCCGCGACCT GTTCCAGACG
GCTCGGCGCC AGTCCCCGTC GATCATCTTC ATCGACGAGA TCGACTCCAT CGGTCGTAAG
CGCGGGACAG GTCTCGGCGG CGGACACGAC GAGCGCGAGC AGACCCTGAA CCAGATGCTC
TCGGAGATGG ACGGGTTCGA TCCGGCTGAG GGCATCGTCG TGATGGCCGC CACCAACCGT
CCCGACATCC TCGACCCGGC GCTGCTGCGC CCGGGACGCT TCGACCGTCA GATCGTCGTT
CCGCTCCCCG ATCTCCCCGA ACGGCTCGCC ATCTTGCAGG TCCACACGAG AGGCAAGCGC
CTCGCGCCCG ACGTCGATCT CGAGGTCATG GCGAAGGGCA CGCCGGGGAT GAGCGGTGCC
GATCTCGCCA ACTTGGTCAA CGAGGCTGCG CTCAACGCCG TCCGCAGGGG CGCGACCGAC
ATCGCCATGG CAGACTTCGA CTCTGCACGA GATCGCATCA TCATGGGCCA GCGCCGCGAG
GCCACCATCC TCTCCGACGA GGAGAAGGAG CGTGTCGCGT TCCACGAAGG CGGACACGCC
GTGCTGGCCT ATGTGCTCGA TTACTCAGAT CCCGTCCACA AGGTCACCAT CCTCCCGACC
GGCATGGCCC TCGGCGTCAC CCAGCAGCTC CCAGAGCGCG ATCGACACCT CTATCCGCGC
GAGTACATCG AGGACACGCT CGTGGTTCGG ATGGGAGGTC GCGTCGCCGA GCTGCTGGTC
TACGGGGATC TCTCGACGGG AGCCGCCAAC GACCTCCAGG GCAACACCGA GCTCGCTCGC
AGGATGGTTC GCGAGTGGGG CATGAGCGAG CGACTCGGGC CGATGGCGTG GGGTTCGCAG
AACGTCGTCT TCCTCGGCGA GGACCTCCTC CACTCGGCCG AGTACTCCGA CCGCACGGCT
CGCCTCGTCG ACGAAGAGGT CGAACGCATC CTGCGCGAAC AGGAGGAACG CGCGACCGAG
CTGCTCCGCC AGCACCTCCC GGGCCTCATC GCGGTGGCGC ACGCACTCCT CGAACGCGAG
ACCATCTCGG GCGAAGAGGT CGGGCGTCTG GTGGACGAGG CGGCAGGCCA CCCGATCCAC
CCCGACGGCA AGCGGGTCCT GCCGATCGCC AAGCTCCCGG AGTACGCCGA GCTCGAGCAG
TTCACCGTCA CGAACGGCAA CAATCACGCT GCATCGCACG ACGACACCGA CCCCGTCAGC
TGA
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| Protein sequence | MMPSSQRPSP RGSRQSPSPD QRGRIAFAIL ATLVVAVLLL TLFSHAPSGQ PLGYSTFIHD
VQAKQVRTAV LNNTTGQITG SLTNGTAYSV TGPLPYTSSE LSTLSKAHVQ VSYITPGPGI
ASTIIEYVIF FGIFIGIWVY LTRRTQGSVN GIMSVGRSRA KTYTTERPKT TFDDVAGYQG
VKGEVKEVVD FLRDPSRFSQ LGARIPKGIL LVGPPGTGKT LLARAVAGEA GVPFMSVSGS
DFMEMFVGVG AARVRDLFQT ARRQSPSIIF IDEIDSIGRK RGTGLGGGHD EREQTLNQML
SEMDGFDPAE GIVVMAATNR PDILDPALLR PGRFDRQIVV PLPDLPERLA ILQVHTRGKR
LAPDVDLEVM AKGTPGMSGA DLANLVNEAA LNAVRRGATD IAMADFDSAR DRIIMGQRRE
ATILSDEEKE RVAFHEGGHA VLAYVLDYSD PVHKVTILPT GMALGVTQQL PERDRHLYPR
EYIEDTLVVR MGGRVAELLV YGDLSTGAAN DLQGNTELAR RMVREWGMSE RLGPMAWGSQ
NVVFLGEDLL HSAEYSDRTA RLVDEEVERI LREQEERATE LLRQHLPGLI AVAHALLERE
TISGEEVGRL VDEAAGHPIH PDGKRVLPIA KLPEYAELEQ FTVTNGNNHA ASHDDTDPVS
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