Gene Afer_1587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAfer_1587 
Symbol 
ID8323678 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidimicrobium ferrooxidans DSM 10331 
KingdomBacteria 
Replicon accessionNC_013124 
Strand
Start bp1672085 
End bp1672849 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content68% 
IMG OID644952724 
Productprotein of unknown function DUF124 
Protein accessionYP_003110182 
Protein GI256372358 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00266] conserved hypothetical protein TIGR00266 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.215755 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCAGGCAT CCATCAAGGG TTCGACGATG CCGGTGCTCG AGATCGTCCT CGATCCCGGG 
GACCATCTCG TGAGCGATCG CGGCGAGCTG TCGTGGATGT CGGCCAACGT GCGCATGACC
CAGACGACCG GAGCTGCAGG GGGCGGCTTG ATGGGCGCGT TGAAGCGCGT CGCTGGCGGG
GGGAGTCTGC TGCTCACGCA CTTCGAGGCC ACGGGCGGAC CGGGATTCGT CGCCTTCGGT
GCCAAGCTCC CCGGTCACAT CGTTCCGCTC GAGATCGCGC AGGGGCAGGC CTACCTCGTG
CATCGCGATG GCTGGGTCTG TGGGACGGGC GATGTCGTCG CTTCCATGGC CTTCCAGCAG
TCGCTCGGTG GGGCGCTCTT CGGGAAGGAG GGGTTCATCC TCCAGCGGCT CGAAGGACAT
GGTACGGCAT GGATCGAACT CGGGGGCGAG ATGGTCAACT ATCAGCTCGC CGAGGGCCAA
CAGCTGCTGG TTCACCCTGG CCACGTTGGC GCGTTCGCTG AGACGGTTCA GTTCCAGGTG
ACACGGGTAC CGGGGATCGT CAATCGCTGG GCGGGTGGTG ATGGTCATTG GCTGGTGCAG
CTCGTCGGGC CCGGCCAGGT CTGGCTCCAG TCGATGCCGC TGGCGGTGCT CGCCCAGGCG
CTCGGGCCCT ACCTTGGCGC CTCGGATGCG GTCGCTGGTG GCGTCGCCGG TGGCGTTGCA
GGCGGTTCCC TCGGGGGGAT CCTCGGCGAC ATGCTCGGGC GCTAG
 
Protein sequence
MQASIKGSTM PVLEIVLDPG DHLVSDRGEL SWMSANVRMT QTTGAAGGGL MGALKRVAGG 
GSLLLTHFEA TGGPGFVAFG AKLPGHIVPL EIAQGQAYLV HRDGWVCGTG DVVASMAFQQ
SLGGALFGKE GFILQRLEGH GTAWIELGGE MVNYQLAEGQ QLLVHPGHVG AFAETVQFQV
TRVPGIVNRW AGGDGHWLVQ LVGPGQVWLQ SMPLAVLAQA LGPYLGASDA VAGGVAGGVA
GGSLGGILGD MLGR